Evidence map›Paper›PMID 40510349›Full record

ArticleFrontiers in immunology2025

Identification and validation of cellular senescence-related genes and immune cell infiltration characteristics in intervertebral disc degeneration.

Hao Li, Lei Miao, Jiayuan Wu, Ye Wang, Jiyuan Xia, Da He

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Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Hao Li *Department of Orthopedics, Beijing Jishuitan Hospital, Capital Medical University, Beijing, China.
Lei Miao *School of Computer Science, South China Business College of Guangdong University of Foreign Studies, Guangzhou, China.
Jiayuan WuDepartment of Orthopedics, Beijing Jishuitan Hospital, Capital Medical University, Beijing, China.
Ye WangDepartment of Orthopedics, Beijing Jishuitan Hospital, Capital Medical University, Beijing, China.
Jiyuan XiaDepartment of Orthopedics, Beijing Jishuitan Hospital, Capital Medical University, Beijing, China.
Da HeDepartment of Orthopedics, Beijing Jishuitan Hospital, Capital Medical University, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: To identify cell senescence-related genes and immune cell infiltration characteristics in intervertebral disc degeneration (IVDD) using bioinformatics and investigate their biological functions and signaling pathways. Methods: GSE56081 and GSE23130 datasets were downloaded from the Gene Expression Omnibus (GEO) database. The former was used for the analysis of differentially expressed genes (DEGs) and the latter was used as the validation set. Intersection analysis of DEGs and cell senescence-related genes was performed to screen for senescence-related differentially expressed genes (SRDEGs). SRDEGs were analyzed using Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). A protein-protein interaction (PPI) network was also drawn, and the hub SRDEGs were obtained using 11 different algorithms. Immune infiltration analysis was then performed. Receiver operating characteristic (ROC) curve and quantitative polymerase chain reaction (qPCR) were used to evaluate the diagnostic value of the hub SRDEGs. Results: Four hub SRDEGs, SP1, FOXO1, ESR1, and MAPK1, were identified. SP1 was downregulated in IVDD, while the other three hub genes were upregulated. ROC curve verification showed that the AUC for SP1, FOXO1, ESR1, and MAPK1 were 0.483, 0.683, 0.683, and 0.725, respectively. RT-qPCR confirmed that MAPK1 expression was higher in the degeneration group (t = 3.229, P <0.001). Immune infiltration analysis demonstrated elevated proportions of CD8 T cells and activated NK cells in IVDD samples, with MAPK1 showing positive correlations with CD8 T cells, activated NK cells, and neutrophils but negative correlations with naive CD4 T cells, B memory cells, and resting NK cells. Conclusion: These findings highlight MAPK1 as a pivotal regulator of cellular senescence and immune cell infiltration in IVDD pathogenesis, offering novel therapeutic targets for intervention.

Indexed as

Cellular SenescenceIntervertebral Disc DegenerationComputational BiologyDatabases, GeneticGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansProtein Interaction MapsTranscriptomecellular senescenceGEO databaseimmune infiltrationintervertebral disc degenerationMAPK1

Identifiers

PMID40510349
PMCPMC12158716

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