Evidence map›Paper›PMID 40510263›Full record

ArticleInfection and drug resistance2025

Identification of OqxB Efflux Pump and Tigecycline Resistance Gene Cluster

Tivkaa Joseph Amande, Vanessa Kaszyk, Fiona Brown

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Infection and drug resistance, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Cultivation ofBiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tivkaa Joseph AmandeSchool of Life and Health Sciences, University of Roehampton, London, UK.ORCID 0000-0001-9656-9741
Vanessa KaszykDepartment of Biological Sciences, University Centre Peterborough, Part of Inspire Education Group, Peterborough, UK.ORCID 0009-0004-9178-1208
Fiona BrownDepartment of Biological Sciences, University Centre Peterborough, Part of Inspire Education Group, Peterborough, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: To identify antibiotic resistance genes (ARGs) and understand the molecular basis of multidrug resistance in Methods: Whole-genome sequencing of isolate G3 was conducted at 30X coverage using Illumina NovaSeq 6000. Reads were trimmed using Trimmomatic and assessed using a combination of scripts that incorporated Samtools, BedTools, and bwa-mem. Results: Conclusion: Our findings offer new insights into the reservoir of ARGs in the draft genome of

Indexed as

antibiotic resistance genesbacterial genomicsOqxB RND efflux pumpPseudomonas stutzeritmexC3D2-toprJ3whole-genome sequencing

Identifiers

PMID40510263
PMCPMC12159542

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.