Evidence map›Paper›PMID 40506695›Full record

ReviewMicrobial cell factories2025

Establishing Halomonas as a chassis for industrial biotechnology: advances in synthetic biology tool development and metabolic engineering strategies.

André A B Coimbra, Satya Prakash, José I Jiménez, Leonardo Rios-Solis

Abstract readReview
In one paragraph

Review in Microbial cell factories, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Complete genome sequence ofMicrobiology resource announcements · 2026
    Article
  4. COApplied microbiology and biotechnology · 2026
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

André A B CoimbraDepartment of Biochemical Engineering, Bernard Katz Building, University College London, Malet Pl, London, WC1E 6BT, UK.
Satya PrakashDepartment of Life Sciences, Imperial College London, South Kensington, London, SW7 2AZ, UK.
José I JiménezDepartment of Life Sciences, Imperial College London, South Kensington, London, SW7 2AZ, UK.
Leonardo Rios-SolisDepartment of Biochemical Engineering, Bernard Katz Building, University College London, Malet Pl, London, WC1E 6BT, UK. leo.rios@ucl.ac.uk.

Funding

Engineering and Physical Sciences Research Council EP/T517793/1Horizon 2020 Framework Programme 101000794
6 · The paper itself

Abstract

backgroundHalomonas species have recently emerged as promising chassis organisms for next-generation industrial biotechnology, due to their ability to thrive under high-salt conditions, where most microorganisms cannot survive. This feature minimizes contamination risks, thus enabling cultivation under open, unsterile conditions. In addition, many Halomonas species naturally produce large amounts of the bioplastic polyhydroxybutyrate and the high-value osmolyte ectoine. MAIN TEXT: This review explores the development of genetic manipulation tools and their pivotal role in establishing the genus Halomonas as an industrial chassis. Key additions to the synthetic biology toolbox, including cloning vectors, genetic parts, and genome editing systems are highlighted, along with challenges faced for their adoption, such as difficulties in transformation. In addition, we showcase how these tools have been employed for the development of more robust, high-producing strains through metabolic engineering, as well as for expanding the portfolio of target metabolites produced by Halomonas.

conclusionRecent developments in synthetic biology tools and metabolic engineering highlighted in this review underscore the potential of Halomonas for large scale metabolite production and provide a promising outlook towards their role as a microbial chassis in industrial biotechnology.

Indexed as

BiotechnologyHalomonasIndustrial MicrobiologyMetabolic EngineeringSynthetic BiologyAmino Acids, DiaminoGene EditingAmino Acids, DiaminoectoineBioplasticEctoine, chassisHalomonasIndustrial biotechnologyMetabolic engineeringNon-sterile bioprocessingSynthetic biology

Identifiers

PMID40506695
PMCPMC12164125

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.