Evidence map›Paper›PMID 40504610›Full record

ArticleJournal of food science2025

Investigation of the Antioxidant, Antibiofilm, and Endocrine-disrupting Potential of Amaranthus retroflexus Methanol Extract Used as Food: Network and Molecular Docking Analyses.

Mehmet Aytar, Emine İncilay Torunoğlu, Erdi Can Aytar, Alper Durmaz, Betül Aydın, Abidin Gümrükçüoğlu

Abstract read
In one paragraph

Article in Journal of food science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mehmet AytarInstitute of Science, Aydın Adnan Menderes University, Aydın, Türkiye.
Emine İncilay TorunoğluDepartment of Medical Biochemistry, Necmettin Erbakan University, Konya, Türkiye.
Erdi Can AytarDepartment of Horticulture, Uşak University, Uşak, Türkiye.ORCID https://orcid.org/0000-0001-6045-0183
Alper DurmazAli Nihat Gökyiğit Botanical Garden Application and Research Center, Artvin Çoruh University, Artvin, Türkiye.
Betül AydınDepartment of Biology, Gazi University, Ankara, Türkiye.
Abidin GümrükçüoğluMedicinal-Aromatic Plants Application and Research Center, Artvin Çoruh University, Artvin, Türkiye.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aims to investigate the antioxidant and iron chelating activities; phytochemical composition; and profile, antibiofilm activity, in silico molecular docking, and network analysis of the methanol extract of Amaranthus retroflexus. The extract showed an IC₅₀ value of 3.50 mg/mL in the DPPH assay and 6.61 mg/mL in the iron-chelating assay. The total phenolic and flavonoid contents were determined as 30.54 mg GAE/g DW and 29.28 mg QE/g DW, respectively. Antibiofilm tests revealed 7% inhibition against Pseudomonas aeruginosa, while biofilm formation increased by 10% in Staphylococcus aureus 25923. HPLC analysis identified key bioactive compounds, including ascorbic acid, gallic acid, vanillic acid, rosmarinic acid, oleuropein, rutin, and quercetin. Macroelement analysis indicated high potassium and magnesium levels, highlighting the plant's nutritional potential. In the in silico endocrine-disrupting analysis, compounds such as ascorbic acid, vanillic acid, and quercetin exhibited a low-risk profile, while rosmarinic acid, gallic acid, and baicalin demonstrated moderate binding potential with specific receptors. Molecular docking studies demonstrate that oleuropein, rutin, and baicalin exhibit strong binding affinity with target proteins. Network analysis has identified key biological pathways related to inflammation, oxidative stress, and immune modulation, highlighting the roles of rutin and oleuropein in managing P. aeruginosa infections. Following the network analysis, molecular docking studies reveal that oleuropein and rutin have an even stronger binding affinity with target proteins. PRACTICAL APPLICATION: The findings of this study suggest that Amaranthus retroflexus extract may serve as a natural source of antioxidant and iron-chelating agents, as well as bioactive compounds with potential roles in managing bacterial biofilm formation. Due to its phytochemical richness and essential mineral content, the extract could be further explored in the development of plant-based supplements, functional foods, or natural preservatives. This research provides a foundation for future studies focused on safe and sustainable health-supporting products.

Indexed as

AmaranthusAnti-Bacterial AgentsAntioxidantsBiofilmsPlant ExtractsFlavonoidsGallic AcidIron Chelating AgentsMethanolMolecular Docking SimulationPhenolsPseudomonas aeruginosaRutinStaphylococcus aureusAnti-Bacterial AgentsAntioxidantsFlavonoidsGallic AcidIron Chelating AgentsMethanolPhenolsPlant ExtractsRutinAmaranthus retroflexus antioxidant activityantibiofilm activitymolecular dockingnetwork analysis

Identifiers

PMID40504610
PMCPMC12161443

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.