Evidence map›Paper›PMID 40504258›Full record

ArticleJournal of computer-aided molecular design2025

Structure-guided discovery of microtubule affinity-regulating kinase 4 inhibitory potential of Harmane: towards therapeutic targeting of Alzheimer's disease.

Afzal Hussain, Md Nayab Sulaimani, Shumayila Khan, Saleha Anwar, Mohammed F Hawwal, Mohamed F Alajmi, Dharmendra Kumar Yadav, Md Imtaiyaz Hassan

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Article in Journal of computer-aided molecular design, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Afzal HussainDepartment of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia.
Md Nayab SulaimaniCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi, 110025, India.
Shumayila KhanInternational Health Division, Indian Council of Medical Research, Ansari Nagar, New Delhi, 110029, India.
Saleha AnwarCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi, 110025, India.
Mohammed F HawwalDepartment of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia.
Mohamed F AlajmiDepartment of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, Saudi Arabia.
Dharmendra Kumar YadavDepartment of Biologics, College of Pharmacy, Gachon University, Incheon, Republic of Korea. dharmendra@gachon.ac.kr.
Md Imtaiyaz HassanCentre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi, 110025, India. mihassan@jmi.ac.in.

Funding

Central Council for Research in Unani Medicine Grant No. 3-69/2020- CCRUM/TechKing Saud University RSPD2025R980
6 · The paper itself

Abstract

Microtubule affinity-regulating kinase (MARK), particularly MARK4, are involved in the pathological phosphorylation of tau, contributing to neurodegenerative diseases and conditions such as cancer, inflammation, and atherosclerosis. The β-carboline family, specifically Harmane, exhibits broad biological activity, including neuroprotective effects. We investigated the inhibitory potential of Harmane against MARK4 using both computational and experimental approaches. The interaction between Harmane and MARK4 was studied using a combination of computational and experimental approaches. Molecular docking was carried out to understand the binding of Harmane to the binding pocket of MARK4, focusing on key interactions. Molecular dynamics simulations further assessed the stability of the MARK4-Harmane complex. Enzyme inhibition assays were conducted to assess Harmane's inhibitory potential on kinase, and a fluorescence quenching assay was complemented to validate the binding affinity of Harmane with MARK4. Molecular docking revealed that Harmane binds to the active site of MARK4, a finding supported by molecular dynamics simulations, demonstrating increased stability of the MARK4-Harmane complex. Structural analysis further highlighted the specificity of this interaction. Enzyme inhibition assays estimated Harmane's IC

Indexed as

Alzheimer DiseaseHarmineNeuroprotective AgentsProtein Kinase InhibitorsProtein Serine-Threonine KinasesBinding SitesCatalytic DomainHumansMolecular Docking SimulationMolecular Dynamics SimulationProtein BindingharmanHarmineMARK4 protein, humanNeuroprotective AgentsProtein Kinase InhibitorsProtein Serine-Threonine KinasesAlzheimer's diseaseDrug discoveryKinase inhibitorsMD simulationsNatural productsTauopathies

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.