Evidence map›Paper›PMID 40502967›Full record

ArticleACS catalysis2025

Turning Enzyme Models into Model Enzymes in a Substrate-Tailored, Desolvated Active Site.

Mohan Lakavathu, Yan Zhao

Abstract read
In one paragraph

Article in ACS catalysis, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Mohan LakavathuDepartment of Chemistry, Iowa State University, Ames, Iowa 50011, United States.
Yan ZhaoDepartment of Chemistry, Iowa State University, Ames, Iowa 50011, United States.ORCID https://orcid.org/0000-0003-1215-2565

Funding

Mimics of Enzymes and Antibodies for Glycans and Other Biological TargetsR35GM156461 · NIGMS · IOWA STATE UNIVERSITY · PI Yan Zhao · 2025 to 2026
$822k
NIGMS NIH HHS R35 GM156461
6 · The paper itself

Abstract

Once taken out of the active sites, the same functional groups used by enzymes for catalysis tend to lose their "magical" catalytic power in small-molecule enzyme models. We report a small-molecule enzyme model that activates a benzylic alcohol by a nearby amine for the nucleophilic attack of an activated ester. Only when the two groups are placed inside a substrate-tailored hydrophobic pocket can they display catalytic turnovers and even become reactive enough to hydrolyze amides catalytically near physiological conditions, a long-standing goal for synthetic protease mimics. These results suggest that the large gap between the innumerable catalytically incompetent small-molecule enzyme models made by chemists and true enzyme-like catalysts could be bridged by environmental engineering, which in this work enables a simple combination of a tertiary amine and an alcohol to replicate the catalytic properties of serine protease in hydrolyzing aryl amides with substrate specificity.

Indexed as

amide hydrolysisartificial enzymemolecular imprintingnucleophilicityselectivityserine protease

Identifiers

PMID40502967
PMCPMC12150261

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.