Evidence map›Paper›PMID 40502237›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2025

Suicide Phenotyping from Clinical Notes in Safety-Net Psychiatric Hospital Using Multi-Label Classification with Pre-Trained Language Models.

Zehan Li, Yan Hu, Scott Lane, Salih Selek, Lokesh Shahani, Rodrigo Machado-Vieira, Jair Soares, Hua Xu, Hongfang Liu, Ming Huang

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zehan LiMacWilliam School of Biomedical Informatics, The University of Texas Health Science Center at Houston, TX, USA.
Yan HuMacWilliam School of Biomedical Informatics, The University of Texas Health Science Center at Houston, TX, USA.
Scott LaneDepartment of Psychiatry & Behavioral Sciences, McGovern Medical School, The University of Texas Health Science at Houston, Houston, TX, USA.
Salih SelekDepartment of Psychiatry & Behavioral Sciences, McGovern Medical School, The University of Texas Health Science at Houston, Houston, TX, USA.
Lokesh ShahaniDepartment of Psychiatry & Behavioral Sciences, McGovern Medical School, The University of Texas Health Science at Houston, Houston, TX, USA.
Rodrigo Machado-VieiraDepartment of Psychiatry & Behavioral Sciences, McGovern Medical School, The University of Texas Health Science at Houston, Houston, TX, USA.
Jair SoaresDepartment of Psychiatry & Behavioral Sciences, McGovern Medical School, The University of Texas Health Science at Houston, Houston, TX, USA.
Hua XuSection of Biomedical Informatics and Data Science, School of Medicine, Yale University, New Haven, CT, USA.
Hongfang LiuMacWilliam School of Biomedical Informatics, The University of Texas Health Science Center at Houston, TX, USA.
Ming HuangMacWilliam School of Biomedical Informatics, The University of Texas Health Science Center at Houston, TX, USA.

Funding

Semi-structured Information Retrieval in Clinical Text for Cohort IdentificationR01LM011934 · NLM · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI HERSH, WILLIAM R, LIU, HONGFANG · 2014 to 2025
$5.1M
NLM NIH HHS R01 LM011934
6 · The paper itself

Abstract

Accurate identification and categorization of suicidal events can yield better suicide precautions, reducing operational burden, and improving care quality in high-acuity psychiatric settings. Pre-trained language models offer promise for identifying suicidality from unstructured clinical narratives. We evaluated the performance of four BERT-based models using two fine-tuning strategies (multiple single-label and single multi-label) for detecting coexisting suicidal events from 500 annotated psychiatric evaluation notes. The notes were labeled for suicidal ideation (SI), suicide attempts (SA), exposure to suicide (ES), and non-suicidal self-injury (NSSI). RoBERTa outperformed other models using binary relevance (acc=0.86, F1=0.78). MentalBERT (F1=0.74) also exceeded BioClinicalBERT (F1=0.72). RoBERTa fine-tuned with a single multi-label classifier further improved performance (acc=0.88, F1=0.81), highlighting that models pre-trained on domain-relevant data and the single multi-label classification strategy enhance efficiency and performance.

Identifiers

PMID40502237
PMCPMC12150747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.