Evidence map›Paper›PMID 40502189›Full record

ArticlebioRxiv : the preprint server for biology2025

OrganoidChip+: a Microfluidic Platform for Culturing, Staining, Immobilization, and High-Content Imaging of Adult Stem Cell-Derived Organoids.

Khashayar Moshksayan, Rishika Khanna, Berk Camli, Zeynep Nevra Yakay, Anirudha Harihara, Christopher Zdyrski, Sudip Mondal, Evan Hegarty, Jonathan P Mochel, Karin Allenspach and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Khashayar MoshksayanDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.ORCID 0000-0002-5240-8193
Rishika KhannaDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.
Berk CamliDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.
Zeynep Nevra YakayDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX.
Anirudha HariharaDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.
Christopher ZdyrskiDepartment of Pathology, University of Georgia, Athens, GA.ORCID 0000-0002-7556-5298
Sudip MondalDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.ORCID 0000-0002-5387-0064
Evan HegartyDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.
Jonathan P MochelDepartment of Pathology, University of Georgia, Athens, GA.
Karin AllenspachDepartment of Pathology, University of Georgia, Athens, GA.ORCID 0000-0002-2168-5809
Adela Ben-YakarDepartment of Mechanical Engineering, University of Texas at Austin, Austin, TX.ORCID 0000-0003-3468-6146

Funding

A Large-Scale Microfluidics Imaging Platform for High-Throughput Toxicity Testing using Canine Intestinal OrganoidsR43ES029890 · NIEHS · VIVOVERSE, LLC · PI HEGARTY, EVAN · 2019 to 2019
$223k
NIEHS NIH HHS R43 ES029890
6 · The paper itself

Abstract

High-content imaging (HCI) and analysis are the keys for advancing our understanding of the science behind organogenesis. To this end, culturing adult stem cell-derived organoids (ASOs) in a platform that also enables live imaging, staining, immobilization, and fast high-resolution imaging is crucial. However, existing platforms only partially satisfy these requirements. In this study, we present the OrganoidChip+, an all-in-one microfluidic device designed to integrate both culturing and HCI of ASOs all within one platform. We previously developed the OrganoidChip as a robust imaging tool. Now, the OrganoidChip+ incorporates several additional features for culturing organoids in addition to fluorescence staining and imaging without the need for sample transfer. The organoids grown within a culture chamber are stained and then transferred to immobilization chambers for blur-free, high-resolution imaging at predetermined locations. We cultured adult stem cell-derived intestinal organoids in the chip for 7 days and tracked growth rates of each organoid using intermittent brightfield images, followed by multiple image-based assays, including viability assay using widefield fluorescence imaging, a redox ratio assay using label-free, two-color, two-photon microscopy, and immunofluorescence assays using confocal microscopy. These assays serve as proof-of-concept to showcase the chip's capabilities in HCI of ASOs. Organoids cultured in the chip exhibited superior average growth rates over those in traditional Matrigel dome cultures, off-chip. Viability and redox ratio measurements of on-chip organoids were comparable or slightly better than their off-chip counterparts. Confocal imaging further confirmed that the OrganoidChip+ supports robust organoid culture while enabling detailed, high-resolution analysis. This all-in-one platform holds great potential for advancing ASO-based research, offering a scalable and cost-effective solution for HCI and analysis in organogenesis, drug screening, and disease modeling.

Identifiers

PMID40502189
PMCPMC12157677

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.