Evidence map›Paper›PMID 40502159›Full record

ArticlebioRxiv : the preprint server for biology2025

Env-antibody coevolution identifies B cell priming as the principal bottleneck to HIV-1 V2 apex broadly neutralizing antibody development.

Rumi Habib, Ryan S Roark, Hui Li, Andrew Jesse Connell, Michael P Hogarty, Kshitij Wagh, Shuyi Wang, Lorie Marchitto, Ashwin N Skelly, John W Carey and 41 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

51 authors.

Ryan S Roark
Hui Li
Andrew Jesse Connell
Michael P Hogarty
Kshitij Wagh
Shuyi Wang
Lorie Marchitto
Ashwin N Skelly
John W Carey
Kirsten J Sowers
Kasirajan Ayyanathan
Samantha J Plante
Frederic Bibollet-Ruche
Younghoon Park
Colby J Agostino
Ajay Singh
Christian L Martella
Emily Lewis
Juliette M Rando
Neha Chohan
Jinery Lora
Wenge Ding
Mary S Campion
Chengyan Zhao
Weimin Liu
Yingying Li
Xuduo Li
Bo Liang
Rohan Roy Chowdhury
Khaled Amereh
Elizabeth Van Itallie
Amrit R Ghosh
Katharine J Bar
Wilton B Williams
Kevin Wiehe
Kevin O Saunders
Robert J Edwards
Derek W Cain
Mark Lewis
Facundo D Batista
Dennis R Burton
Raiees Andrabi
Daniel W Kulp
Barton F Haynes
Bette Korber
Lawrence Shapiro
Peter D Kwong
Beatrice H Hahn
George M Shaw

Funding

Reverse Vaccinology in SHIV Infected Macaques as a Molecular Guide for HIV-1 Vaccine DesignR01AI160607 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SHAW, GEORGE M · 2021 to 2024
$3.2M
Harnessing SHIVs and Sequential Immunization to Elicit V3 Glycan-Targeted bNAbs against HIV-1F30AI179430 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SKELLY, ASHWIN NICHOLAS · 2024 to 2024
$37k
NIAID NIH HHS F30 AI179430NIAID NIH HHS R01 AI160607
6 · The paper itself

Abstract

Broadly neutralizing antibodies (bNAbs) are rarely elicited during HIV-1 infection. To identify obstacles to bNAb development, we longitudinally studied 122 rhesus macaques infected by one of 16 different simian-human immunodeficiency viruses (SHIVs). We identified V2 apex as the most common bNAb target and a subset of Envs that preferentially elicited these antibodies. In 10 macaques, we delineated Env-antibody coevolution from B cell priming to bNAb development. Antibody phylogenies revealed permissive developmental pathways guided by evolving Envs that contained few mutations in or near the V2 apex C-strand, which were a sensitive indicator of apex-targeted responses. The absence of such mutations reflected a failure in bNAb priming. These results indicate that efficiency of B cell priming, and not complexities in Env-guided affinity maturation, is the primary obstacle to V2 apex bNAb elicitation in SHIV-infected macaques and identify specific HIV-1 Envs to advance as novel vaccine platforms. One sentence summary: B cell priming is the primary bottleneck to HIV-1 V2 apex bNAb elicitation.

Identifiers

PMID40502159
PMCPMC12154871

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.