Evidence map›Paper›PMID 40500764›Full record

ArticleBMC microbiology2025

Prevalence and emm typing of multi-drug resistant Streptococcus pyogenes in tertiary care health settings.

Abdul Basit, Mubbashir Hussain, Muhammad Qasim, Fozia Fozia, Hassan Naveed, Abdul Rehman, Ijaz Ahmad, Mohamed Mohany, Salim S Al-Rejaie, Sinisa Djurasevic

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Molecular Characterization ofMicroorganisms · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Abdul BasitDepartment of Microbiology, Kohat University of Science and Technology (KUST), Kohat, 26000, Pakistan.
Mubbashir HussainDepartment of Microbiology, Kohat University of Science and Technology (KUST), Kohat, 26000, Pakistan. mubbashir.hussain@kust.edu.pk.
Muhammad QasimDepartment of Microbiology, Kohat University of Science and Technology (KUST), Kohat, 26000, Pakistan.
Fozia FoziaBiochemistry Department, Khyber Medical University Institute of Medical Sciences, Kohat, 26000, Pakistan. drfoziazeb@yahoo.com.
Hassan NaveedDepartment of Microbiology, Kohat University of Science and Technology (KUST), Kohat, 26000, Pakistan.
Abdul RehmanDepartment of Microbiology, Kohat University of Science and Technology (KUST), Kohat, 26000, Pakistan.
Ijaz AhmadDepartment of Chemistry, Kohat University of Science & Technology, Kohat, 26000, Pakistan.
Mohamed MohanyDepartment of Pharmacology and Toxicology, College of Pharmacy, King Saud University, P.O. Box 55760, 11451, Riyadh, Saudi Arabia.
Salim S Al-RejaieDepartment of Pharmacology and Toxicology, College of Pharmacy, King Saud University, P.O. Box 55760, 11451, Riyadh, Saudi Arabia.
Sinisa DjurasevicFaculty of Biology, University of Belgrade, Belgrade, Serbia.

Funding

Khyber Medical University Publication Fund (No.DIR/ORIC/Ref/24/00085).King Saud university Researchers Supporting Project (RSPD2024R758)
6 · The paper itself

Abstract

backgroundStreptococcus pyogenes causes diverse infections, including pharyngitis and invasive diseases. Emerging resistance to β-lactams and macrolide poses a significant public health threat in developing countries. This study examines the prevalence, antibiotic susceptibility, and emm types of S. pyogenes strains isolated from hospitals in Khyber Pakhtunkhwa (KP), Pakistan.

methodsA total of 4,062 clinical samples, including throat swabs, blood, pus, and biopsies, were collected from eight hospitals. S. pyogenes was isolated and identified using standard microbiological techniques. Antibiotic susceptibility tests and Minimum Inhibitory Concentrations (MIC) were investigated using the disc diffusion method and Epsilometer test (E-test), respectively. PCR and DNA sequencing were used to determine the emm typing of the isolates.

resultsOf the 4,062 samples, 471 were positive for S. pyogenes (11.5%). The most common emm types identified were emm12 (16%), emm4 (13%), and emm1 (12%). Isolates from the throat samples predominantly yielded emm1. However, emm12 was most common in biopsy and blood samples, and emm4 was frequently isolated from pus. High resistance to erythromycin (8%) and tetracycline (8%) and no resistance to meropenem, vancomycin, and teicoplanin were recorded. Penicillin resistance ranged from 0.6% to 7.2%, with MIC distribution between 0.07-2.9 mg/L. Factors including low financial status (AOR = 3.18, 95% CI = 1.60-6.32, P = 0.05), self-medication with unprescribed antibiotics (AOR = 5.45, 95% CI = 2.60-11.22, P = 0.04), and presence of comorbidities (AOR = 9.13, 95% CI = 2.54-26.54, P = 0.03) were significantly associated with increased risk of infection.

conclusionThe emm typing results revealed significant genetic diversity among S. pyogenes isolates, with emm12, emm4, and emm1 being the most prevalent types in KP. This diversity, along with the observed antibiotic resistance patterns, underscores the need for ongoing surveillance and targeted treatment strategies to effectively manage S. pyogenes infections in the region.

Indexed as

Antigens, BacterialBacterial Outer Membrane ProteinsCarrier ProteinsDrug Resistance, Multiple, BacterialStreptococcal InfectionsStreptococcus pyogenesAdolescentAdultAnti-Bacterial AgentsChildChild, PreschoolFemaleHumansInfantMaleMicrobial Sensitivity TestsAnti-Bacterial AgentsAntigens, BacterialBacterial Outer Membrane ProteinsCarrier Proteinsstreptococcal M proteinAntibiotic resistanceEmm typingKhyber PakhtunkhwaS. pyogenes

Identifiers

PMID40500764
PMCPMC12153153

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.