Evidence map›Paper›PMID 40498535›Full record

ArticleGigaScience2025

The FIP 1.0 Data Set: Highly resolved annotated image time series of 4,000 wheat plots grown in 6 years.

Lukas Roth, Mike Boss, Norbert Kirchgessner, Helge Aasen, Brenda Patricia Aguirre-Cuellar, Price Pius Atuah Akiina, Jonas Anderegg, Joaquin Gajardo Castillo, Xiaoran Chen, Simon Corrado and 18 more

Abstract readDataset
In one paragraph

Article in GigaScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Lukas RothETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0003-1435-9535
Mike BossETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-7234-3796
Norbert KirchgessnerETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0001-8517-6555
Helge AasenETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0003-4343-0476
Brenda Patricia Aguirre-CuellarETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-0991-6205
Price Pius Atuah AkiinaETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Jonas AndereggETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-3345-4696
Joaquin Gajardo CastilloETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0001-9144-4384
Xiaoran ChenETH Zürich and EPFL, Swiss Data Science Center, 8092 Zürich and 1015 Lausanne, Switzerland.ORCID 0000-0002-8314-4047
Simon CorradoETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Krzysztof CybulskiETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Beat KellerETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0001-5852-6660
Stefan Göbel KortsteeETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Lukas KronenbergETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-2840-7676
Frank LiebischETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0003-0000-7491
Paraskevi NousiETH Zürich and EPFL, Swiss Data Science Center, 8092 Zürich and 1015 Lausanne, Switzerland.ORCID 0000-0002-3087-3174
Corina OppligerETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-2866-6061
Gregor PerichETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-5093-5352
Johannes PfeiferETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Kang YuETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-0686-6783
Nicola StorniETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Flavian TschurrETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0001-7986-1556
Simon TreierETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0009-0002-1333-2197
Michele VolpiETH Zürich and EPFL, Swiss Data Science Center, 8092 Zürich and 1015 Lausanne, Switzerland.ORCID 0000-0003-2771-0750
Hansueli ZellwegerETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.
Olivia ZumstegETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0009-0009-3526-2119
Andreas HundETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0002-2309-1625
Achim WalterETH Zürich, Institute of Agricultural Sciences, 8092 Zürich, Switzerland.ORCID 0000-0001-7753-9643

Funding

Swiss National Science Foundation 169542Swiss National Science Foundation 200756
6 · The paper itself

Abstract

backgroundUnderstanding genotype-environment interactions of plants is crucial for crop improvement, yet limited by the scarcity of quality phenotyping data. This Data Note presents the Field Phenotyping Platform 1.0 data set, a comprehensive resource for winter wheat research that combines imaging, trait, environmental, and genetic data.

findingsWe provide time-series data for more than 4,000 wheat plots, including aligned high-resolution image sequences totaling more than 153,000 aligned images across 6 years. Measurement data for 8 key wheat traits are included-namely, canopy cover values, plant heights, wheat head counts, senescence ratings, heading date, final plant height, grain yield, and protein content. Genetic marker information and environmental data complement the time series. Data quality is demonstrated through heritability analyses and genomic prediction models, achieving accuracies aligned with previous research.

conclusionsThis extensive data set offers opportunities for advancing crop modeling and phenotyping techniques, enabling researchers to develop novel approaches for understanding genotype-environment interactions, analyzing growth dynamics, and predicting crop performance. By making this resource publicly available, we aim to accelerate research in climate-adaptive agriculture and foster collaboration between plant science and machine learning communities.

Indexed as

TriticumCrops, AgriculturalGene-Environment InteractionGenotypePhenotypedeep learning data setfield phenotyping platformhigh-throughput phenotypingimage time seriesprotein contentwinter wheatyield

Identifiers

PMID40498535
PMCPMC12153353

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.