Evidence map›Paper›PMID 40497652›Full record

ArticlePlant & cell physiology2025

Partial photoswitching of rod-shaped phycobilisome production in the cyanobacterium Synechocystis sp. PCC 6803.

Mutsumi Kubushiro, Takuto Otsu, Naomi Misawa, Masako Hamada, Toshihiko Eki, Shigeru Kawai, Yuu Hirose

Abstract read
In one paragraph

Article in Plant & cell physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mutsumi KubushiroDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.
Takuto OtsuDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.
Naomi MisawaDepartment for Advanced Medicine for Viral Infections, National Center for Child Health and Development, National Center for Child Health and Development, 2-10-1 Okura, Setagaya, Tokyo 157-8535, Japan.
Masako HamadaDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.
Toshihiko EkiDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.ORCID 0000-0003-1553-8279
Shigeru KawaiDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.
Yuu HiroseDepartment of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.ORCID 0000-0003-1116-8979

Funding

Japan Society for the Promotion of Science 23H04962Japan Society for the Promotion of Science 25K02239
6 · The paper itself

Abstract

Certain cyanobacteria can alter the structure of their photosynthetic supercomplex phycobilisome (PBS) in response to changes in ambient light color. This process is known as chromatic acclimation (CA) and is classified into seven types (CA1-CA7), each involving distinct modifications of PBS structure. Among them, CA1 is defined as the regulation of the rod-shaped PBS in response to green and red light, maintaining the excitation balance between the two photosystems. Synechocystis sp. PCC 6803 (PCC 6803) is a widely used model cyanobacterium for photosynthesis research and harbors the CcaSR photosensory gene cluster for CA1. In this study, we investigated the wavelength dependence of the rod-shaped PBS production in PCC 6803. RNA-Seq analysis revealed that the expression of cpcL, which encodes a rod-membrane linker protein of rod-shaped PBS, is upregulated under a wide range of visible light (470-630 nm) and partially suppressed under violet (380-420 nm) and red to far-red light (680-720 nm) conditions. Low-temperature fluorescence emission spectra revealed that the ratio of rod-shaped PBS to hemi-discoidal PBS was highest under green light (530 nm), followed by red (660 nm) and far-red (700 nm) conditions. Furthermore, the isolation of intact PBS fractions using an improved procedure revealed the presence of rod-shaped PBS containing CpcL under these light conditions. The incomplete photoswitching of the rod-shaped PBS production may be due to the adaptation of the photosensory CcaSR system in PCC 6803, which lacks green-absorbing components in its PBSs and provides green-light rich environments in their cell aggregates.

Indexed as

PhycobilisomesSynechocystisBacterial ProteinsGene Expression Regulation, BacterialLightPhotosynthesisBacterial ProteinsPhycobilisomeschromatic acclimationcyanobacteriaphycobilisome

Identifiers

PMID40497652
PMCPMC12461855

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.