Evidence map›Paper›PMID 40496189›Full record

ArticlePNAS nexus2025

Rapid diagnosis of ocular viral infections via single-virus detection using solid-state nanopore: A diagnostic evaluation study.

Noriyasu Hashida, Hiroyasu Takei, Masateru Taniguchi, Norihiko Naono, Takeshi Soma, Yoshinori Oie, Kazuichi Maruyama, Lidya Handayani, Yasuko Mori, Andrew Quantock and 1 more

Abstract read
In one paragraph

Article in PNAS nexus, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Noriyasu HashidaDepartment of Ophthalmology, Osaka University Graduate School of Medicine, Room E7, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.ORCID https://orcid.org/0000-0002-8241-5378
Hiroyasu TakeiAipore Inc., Tokyo 150-8512, Japan.
Masateru TaniguchiThe Institute of Scientific and Industrial Research, Osaka University, Osaka 565-0871, Japan.ORCID https://orcid.org/0000-0002-0338-8755
Norihiko NaonoIntegrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives (OTRI), Osaka University Graduate School of Medicine, Osaka 565-0871, Japan.
Takeshi SomaDepartment of Ophthalmology, Osaka University Graduate School of Medicine, Room E7, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.
Yoshinori OieDepartment of Ophthalmology, Osaka University Graduate School of Medicine, Room E7, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.ORCID https://orcid.org/0000-0003-2291-800X
Kazuichi MaruyamaIntegrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives (OTRI), Osaka University Graduate School of Medicine, Osaka 565-0871, Japan.
Lidya HandayaniDivision of Clinical Virology, Center for Infectious Diseases, Kobe University Graduate School of Medicine, Kobe 650-0017, Japan.
Yasuko MoriDivision of Clinical Virology, Center for Infectious Diseases, Kobe University Graduate School of Medicine, Kobe 650-0017, Japan.ORCID https://orcid.org/0000-0002-6595-8522
Andrew QuantockStructural Biophysics Group, School of Optometry and Vision Sciences, Cardiff University, Wales, Cardiff CF10 3AT, United Kingdom.
Kohji NishidaDepartment of Ophthalmology, Osaka University Graduate School of Medicine, Room E7, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.ORCID https://orcid.org/0000-0001-9069-3610

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid and precise identification and discrimination of causative pathogens are required in the treatment of infectious diseases. Quantitative real-time PCR is used to detect and identify infectious viruses before treatment. Although it is an established modality, results take several hours, even in well-equipped hospitals. It is difficult to simultaneously detect many pathogen types because only a single-virus genome can be amplified per PCR. Recently, an AI-based nanopore machine has been used to identify individual viruses based on electrical conductivity. Here, we recognized a single virus using an AI-based detection system and successfully identified viral particles in clinical samples without the need for any prior treatment. We used a nanopore detector and discriminated among viruses using an AI-based waveform analysis. The efficacy of the AI nanopore detector as an on-site clinical analysis device was validated in cultured herpesvirus samples, and its discrimination capability was verified with clinical samples. The AI nanopore analysis of cultured viruses revealed that

Indexed as

infectionocularsingle-virus detectionsolid-state nanoporevirus

Identifiers

PMID40496189
PMCPMC12150286

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.