Evidence map›Paper›PMID 40495486›Full record

ArticleBMB reports2025

Identification of optimal adenine and cytosine base editors for genome editing in Arabidopsis and soybean.

Yeong Yeop Jeong, Jun Hee Han, Jihyeon Yu, Sangsu Bae, Pil Joon Seo

Abstract read
In one paragraph

Article in BMB reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yeong Yeop JeongPlant Genomics and Breeding Institute, Seoul National University, Seoul 08826; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Korea.
Jun Hee HanDepartment of Chemistry, Hanyang University, Seoul 04673, Korea.
Jihyeon YuMedical Research Center of Genomic Medicine Institute, Seoul National University College of Medicine, Seoul 03080, Korea.
Sangsu BaeMedical Research Center of Genomic Medicine Institute, Seoul National University College of Medicine, Seoul 03080; Cancer Research Institute, Seoul National University College of Medicine, Seoul 03080; Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul 03080, Korea.
Pil Joon SeoPlant Genomics and Breeding Institute, Seoul National University, Seoul 08826; Department of Chemistry, Seoul National University, Seoul 08826; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Base editors, including adenine base editors (ABEs) and cytosine base editors (CBEs), are widely used in numerous organisms to introduce site-specific sequence modifications in genomic DNA without causing double-strand breaks (DSBs). However, these editors exhibit low editing efficiencies, particularly in dicot plants, thereby limiting their application in dicot plant genome engineering. In this study, we assessed the editing efficiencies of various base editors to identify those optimal for base editing in dicot plants. We discovered that ABE8e, an ABE variant, demonstrated superior A-to-G base editing efficiency within A5-A8 windows, and A3A/Y130F-V04, a CBE variant, exhibited the highest C-to-T base editing efficiency within C4-C15 windows in both Arabidopsis and soybean protoplasts. Overall, we recommend these two base editors as prime choices for efficient genome engineering in a range of crop plants. [BMB Reports 2025; 58(7): 288-292].

Indexed as

AdenineArabidopsisCytosineGene EditingGlycine maxCRISPR-Cas SystemsGenome, PlantAdenineCytosine

Identifiers

PMID40495486
PMCPMC12313402

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.