Evidence map›Paper›PMID 40494345›Full record

ArticleCell2025

Microbiota-derived inosine programs protective CD8

Joseph Stevens, Erica Culberson, Jeremy Kinder, Alicia Ramiriqui, Jerilyn Gray, Madeline Bonfield, Tzu-Yu Shao, Faris Al Gharaibeh, Laura Peterson, Shelby Steinmeyer and 9 more

Abstract read
In one paragraph

Article in Cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Microorganisms · 2026
    Article
  5. Immune development in early life.Nature immunology · 2026
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Joseph StevensDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Medical Scientist Training Program, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Immunology Graduate Program, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Erica CulbersonDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Medical Scientist Training Program, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Immunology Graduate Program, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Jeremy KinderDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Infectious Disease, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Alicia RamiriquiDivision of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Jerilyn GrayDivision of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Madeline BonfieldDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Immunology Graduate Program, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Tzu-Yu ShaoDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Infectious Disease, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Faris Al GharaibehDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Laura PetersonDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Shelby SteinmeyerDepartment of Pediatrics, University of Louisville School of Medicine, Louisville, KY, USA.
Emily M EshlemanDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Shikha NegiDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
William ZachariasDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Medical Scientist Training Program, University of Cincinnati College of Medicine, Cincinnati, OH, USA.
Gloria PryhuberDepartment of Pediatrics, School of Medicine, University of Rochester, Rochester, NY, USA.
Oindrila PaulDivision of Neonatology, Children's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Shaon SenguptaDivision of Neonatology, Children's Hospital of Philadelphia, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Theresa AlenghatDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Sing Sing WayDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Infectious Disease, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Hitesh DeshmukhDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA; Division of Neonatology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Division of Immunobiology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA; Center for Inflammation and Tolerance, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA. Electronic address: hitesh.deshmukh@cchmc.org.

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2007 to 2026
$24.4M
BioRepository for INvestigation of Diseases of the Lung (BRINDL) - Phase IIIU01HL148861 · NHLBI · UNIVERSITY OF ROCHESTER · PI GLORIA S PRYHUBER · 2019 to 2026
$9.7M
Pediatric Center--Gene Expression /Developmental ScienceK12HD028827 · NICHD · CINCINNATI CHILDRENS HOSP MED CTR · PI Tina Lee Cheng · 2002 to 2026
$9.6M
ROLE OF ANGPTL4, AN ANGIOGENIC MEDIATOR, IN ARTHRITISP30AR047363 · NIAMS · CINCINNATI CHILDRENS HOSP MED CTR · PI WAGNER, MICHAEL · 2001 to 2015
$9.2M
Host integration of commensal and pathogenic bacterial-derived signalsR01DK116868 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Theresa Alenghat · 2018 to 2026
$4.1M
Cincinnati Center for Excellence in Molecular HematologyP30DK090971 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI ZHENG, YI · 2010 to 2015
$4.0M
Mechanistic evaluation of the role of circadian rhythms in acute lung injury and subsequent recoveryR01HL155934 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI SENGUPTA, SHAON · 2021 to 2025
$2.9M
Kruppel-like factor-2 CD4+ T cells and intestinal inflammationR01AI172960 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI Sing Sing Way · 2023 to 2026
$2.8M
Epigenetic regulation of intestinal tuft cellsR01DK137771 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Theresa Alenghat · 2024 to 2026
$2.5M
Pregnancy induced deacetylation of sialylated glycoproteinsR01AI175431 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI Sing Sing Way · 2024 to 2026
$2.3M
Defining PRC2 complex epigenomic control in alveolar progenitor cellsR01HL166245 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI William John Zacharias · 2023 to 2026
$2.3M
Tissue niches for ILC3 development in newborn's lungR01HL155611 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI DESHMUKH, HITESH · 2021 to 2024
$1.9M
NHLBI NIH HHS F30 HL165594NHLBI NIH HHS R01 HL155611NHLBI NIH HHS R01 HL155934NHLBI NIH HHS R01 HL156860NHLBI NIH HHS R01 HL166245NHLBI NIH HHS R35 HL177131NHLBI NIH HHS U01 HL148861NIAID NIH HHS R01 AI172960NIAID NIH HHS R01 AI175431NIAMS NIH HHS P30 AR047363NICHD NIH HHS K08 HD084686NICHD NIH HHS K12 HD028827NIDDK NIH HHS K01 DK135647NIDDK NIH HHS P30 DK078392NIDDK NIH HHS P30 DK090971NIDDK NIH HHS R01 DK116868NIDDK NIH HHS R01 DK137771
6 · The paper itself

Abstract

Early-life susceptibility to respiratory viral infections remains a major public health concern, yet the underlying mechanisms are poorly understood. We demonstrate that antibiotic-induced dysbiosis impairs influenza-specific CD8

Indexed as

CD8-Positive T-LymphocytesInfluenza, HumanInosineMicrobiotaAnimalsAnimals, NewbornDysbiosisFemaleGastrointestinal MicrobiomeHepatocyte Nuclear Factor 1-alphaHumansInfant, NewbornLungMaleMiceMice, Inbred C57BLHepatocyte Nuclear Factor 1-alphaInosineimmunologyinfantsinfluenzainosinemicrobiotaT cell responses

Identifiers

PMID40494345
PMCPMC12335363

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.