Evidence map›Paper›PMID 40493571›Full record

ArticleACS chemical neuroscience2025

Fluorescence Lifetime-Based FRET Biosensors for Monitoring N Terminal Domain-Dependent Interactions of TDP-43 in Living Cells: A Novel Approach for ALS and FTD Drug Discovery.

Noah Nathan Kochen, Marguerite Murray, Sophia Zafari, Nagamani Vunnam, Elly E Liao, Lihsia Chen, Anthony R Braun, Jonathan N Sachs

Abstract read
In one paragraph

Article in ACS chemical neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. A Universal Protein Ladder for Standardization of Diverse FRET Assays.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Discovery of TDP-43 aggregation inhibitorsbioRxiv : the preprint server for biology · 2026
    Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Noah Nathan KochenDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0002-9475-1766
Marguerite MurrayDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0009-0008-7976-7058
Sophia ZafariDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Nagamani VunnamDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0003-3915-1159
Elly E LiaoDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Lihsia ChenDepartment of Genetics, Cell Biology and Development, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Anthony R BraunDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0002-9942-3390
Jonathan N SachsDepartment of Biomedical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, United States.ORCID 0000-0003-1403-5960

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathological aggregates of TDP-43 are implicated in Alzheimer's disease, frontotemporal dementia, and amyotrophic lateral sclerosis. While therapeutic efforts have traditionally focused on mitigating end-stage TDP-43 aggregation, recent evidence highlights an upstream and potentially targetable event: the loss of functional nuclear TDP-43 multimers due to disrupted N-terminal domain (NTD) interactions. To address this, we developed fluorescence lifetime (FLT)-based FRET biosensors to monitor TDP-43 multimerization in living cells that couple a full-length TDP-43 FLT-FRET biosensor screen with an NTD-deletion counter screen, forming the foundation of a novel high-throughput screening (HTS) platform. Screening the 2682 compound FDA-approved Selleck library, we identified the small molecule ketoconazole, which stabilizes functional nuclear TDP-43 multimers in an NTD-dependent manner with low micromolar potency. Ketoconazole rescues TDP-43 mislocalization and aggregation, restores SREBP2 mRNA levels under TDP-43 overexpression, improves neuronal health, and partially restores motor function in a TDP-43

Indexed as

Amyotrophic Lateral SclerosisBiosensing TechniquesDNA-Binding ProteinsDrug DiscoveryFluorescence Resonance Energy TransferFrontotemporal DementiaAnimalsCaenorhabditis elegansHEK293 CellsHigh-Throughput Screening AssaysHumansKetoconazoleDNA-Binding ProteinsKetoconazoleTARDBP protein, humanALSFRETTDP-43

Identifiers

PMID40493571
PMCPMC12232324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.