Evidence map›Paper›PMID 40493376›Full record

ArticleJournal of the American Chemical Society2025

Chemotype- and Target-Driven Genome Mining for a New Natural Product Inhibitor of Bacterial Peptide Deformylase.

Jonas H Costa-Martini, Eva E Adams, Chad W Johnston

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jonas H Costa-MartiniDepartment of Biochemistry & Molecular Pharmacology, Baylor College of Medicine, Houston, Texas 77030, United States.
Eva E AdamsDepartment of Biochemistry & Molecular Pharmacology, Baylor College of Medicine, Houston, Texas 77030, United States.
Chad W JohnstonDepartment of Biochemistry & Molecular Pharmacology, Baylor College of Medicine, Houston, Texas 77030, United States.ORCID 0000-0002-1988-709X

Funding

A Plug-and-Play Platform for Continuous Directed Evolution of Nonribosomal Peptide SynthetasesR21GM154190 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI JOHNSTON, CHAD WILLIAM · 2024 to 2025
$440k
NIGMS NIH HHS R21 GM154190
6 · The paper itself

Abstract

Antibiotics are essential for modern medicine, but their use drives the evolution of antimicrobial resistance (AMR) that limits the long-term efficacy of any one drug. To keep pace with AMR and preserve our ability to treat bacterial infections, it is essential that we identify antibiotics with new structures and targets that are not affected by clinical resistance. Historically, most developmental candidates for antibiotics have come from microbial natural products, as they feature chemical structures and biological activities that have been honed over millions of years of evolution. Unfortunately, as classical bioactivity screens for natural product discovery are blind to the pharmacological properties of their hits, they often identify molecules with functional groups that limit their utility as drugs. One prominent example is actinonin, an inhibitor of bacterial peptide deformylase (PDF) whose activity is dependent on a hydroxamate moiety associated with toxicity

Indexed as

AmidohydrolasesAnti-Bacterial AgentsBiological ProductsEnzyme InhibitorsGenome, BacterialHydroxamic AcidsactinoninAmidohydrolasesAnti-Bacterial AgentsBiological ProductsEnzyme InhibitorsHydroxamic Acidspeptide deformylase

Identifiers

PMID40493376
PMCPMC12203648

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.