Evidence map›Paper›PMID 40492332›Full record

ArticleAnnals of botany2026

Dynamic evolution of FLC/MAF-like genes accompanying Brassicaceae radiation.

Bin-Yan Zhao, Shi-Zhao Zhou, Jie Liu, Mi-Cai Zhong, Xue Dong, De-Zhu Li, Jin-Yong Hu

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Article in Annals of botany, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 citing paper in PubMed.

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5 · Who and what money

Authors and funding

7 authors.

Bin-Yan ZhaoState Key Laboratory of Plant Diversity and Specialty Crops, Yunnan Key Laboratory of Crop Wild Relatives Omics, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China.
Shi-Zhao ZhouState Key Laboratory of Plant Diversity and Specialty Crops, Yunnan Key Laboratory of Crop Wild Relatives Omics, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China.
Jie LiuState Key Laboratory of Plant Diversity and Specialty Crops, Yunnan Key Laboratory of Crop Wild Relatives Omics, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China.
Mi-Cai ZhongCollege of Horticulture Science and Engineering & Center for Interdisciplinary Biodiversity Research, Shandong Agricultural University, Tai'an, Shandong 271018, China.
Xue DongCollege of Horticulture Science and Engineering & Center for Interdisciplinary Biodiversity Research, Shandong Agricultural University, Tai'an, Shandong 271018, China.
De-Zhu LiGermplasm Bank of Wild Species & Yunnan Key Laboratory for Crop Wild Relatives Omics, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China.ORCID 0000-0002-4990-724X
Jin-Yong HuState Key Laboratory of Plant Diversity and Specialty Crops, Yunnan Key Laboratory of Crop Wild Relatives Omics, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China.ORCID 0000-0003-2187-9168

Funding

811 Project of Shandong Agricultural University 539/539528National Nature Science Foundation of China 32370578Priority Research Program of the Chinese Academy of Sciences XDA0440000Priority Research Program of the Chinese Academy of Sciences XDB31000000
6 · The paper itself

Abstract

BACKGROUND AND

aimsUnderstanding the molecular basis of rapid species radiation remains challenging in evolutionary biology. In angiosperms, Brassicaceae exemplifies rapid radiation following the At-α whole-genome duplication (At-α WGD) event ∼35 million years ago (Mya). However, the molecular features associated with the early Brassicaceae radiation have not been fully elucidated, particularly due to lack of high-quality genomes from the super-tribe Hesperodae (clade E).

methodsUtilizing recently released genomes from Arabodae (clade D) and Hesperodae (clade E), along with 36 additional Brassicaceae species representing all super-tribes of Brassicoideae and Aethionemoideae, we performed phylogenomic analyses to identify patterns of gene family expansion and contraction at key nodes during early radiation. We further investigated genomic synteny and gene expression, with a particular focus on the dynamic expansion of the FLOWERING LOCUS C/MADS-AFFECTING FLOWERING (FLC/MAF) gene family in response to artificial temperature fluctuations. KEY

resultsDating back to the Oligocene-Miocene transition and following the uplift of the Qinghai-Tibet Plateau, Brassicaceae underwent significant radiation with ∼540 expanded gene families, in which 66 genes were involved in flowering time regulation. FLC was first duplicated via the At-α WGD into MAF2/3, which is present in Brassicaceae. Subsequent tandem duplications gave rise to MAF4/5 in core Brassicaceae. Additional random duplications led to FLOWERING LOCUS M (FLM or MAF1) in certain species of the Camelinodae (clade A). These duplicated MAFs exhibit significant diversified expression patterns under turbulent temperature conditions.

conclusionsOur analyses reveal a dynamic, Brassicaceae-specific retention and expansion of FLC/MAFs along with other flowering time regulators during species radiation and historical environmental adaptation, highlighting the role of flowering diversity in Brassicaceae radiation. This work thus provides a valuable model for studying species evolution and diversification in other angiosperm families.

Indexed as

BrassicaceaeEvolution, MolecularGenes, PlantMADS Domain ProteinsPlant ProteinsArabidopsis ProteinsGene DuplicationGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenySyntenyArabidopsis ProteinsAt5g10140 protein, ArabidopsisMADS Domain ProteinsPlant ProteinsAt-α WGDBrassicaceaeFLC/MAFsrandom duplicationtandem duplication

Identifiers

PMID40492332
PMCPMC13487436

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