Evidence map›Paper›PMID 40491440›Full record

ArticleGastro hep advances2025

Modeling 5-Year Hepatocellular Carcinoma Risk in Alaska Native Peoples With Hepatitis B Virus Infection.

Xiaohong Li, Janet M Johnston, Chriss Homan, Tracey L Marsh, Nicole J Kim, Yongjun Liu, Trang VoPham, William M Grady, Jorge Mera, Brian J McMahon and 3 more

Abstract read
In one paragraph

Article in Gastro hep advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Xiaohong LiPublic Health Sciences Division & Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, Washington.
Janet M JohnstonLiver Disease and Hepatitis Program, Alaska Native Tribal Health Consortium, Anchorage, Alaska.
Chriss HomanLiver Disease and Hepatitis Program, Alaska Native Tribal Health Consortium, Anchorage, Alaska.
Tracey L MarshPublic Health Sciences Division & Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, Washington.
Nicole J KimDivision of Gastroenterology, Department of Medicine, Veterans Affairs Puget Sound Health Care System and University of Washington, Seattle, Washington.
Yongjun LiuDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, Washington.
Trang VoPhamPublic Health Sciences Division & Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, Washington.
William M GradyTranslational Science and Therapeutics Division, Public Health Sciences and Clinical Research Divisions, Fred Hutchinson Cancer Center, Division of Gastroenterology, University of Washington School of Medicine, Seattle, Washington.
Jorge MeraInfectious Disease Department, Cherokee Nation Health Services, Tahlequah, Oklahoma.
Brian J McMahonLiver Disease and Hepatitis Program, Alaska Native Tribal Health Consortium, Anchorage, Alaska.
George N IoannouDivision of Gastroenterology, Department of Medicine, Veterans Affairs Puget Sound Health Care System and University of Washington, Seattle, Washington.
Ziding FengPublic Health Sciences Division & Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, Washington.
Qianchuan HePublic Health Sciences Division & Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, Washington.

Funding

The Early Detection Research Network: Data Management and Coordinating CenterU24CA086368 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI RUTH D ETZIONI, Ziding Feng · 2010 to 2026
$75.7M
XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Sheela Sathyanarayana · 1995 to 2026
$42.5M
Consortium on Translational Research in Early Detection of Liver Cancer:Data Management and Coordinating Center (DMCC)U24CA230144 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Ziding Feng · 2018 to 2026
$5.8M
Statistical Methods for RNA-seq Data AnalysisR01GM105785 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Wei Sun · 2014 to 2026
$4.6M
Precompetitive Collaboration on Liquid Biopsy for Early Cancer Assessment: Data Management and Coordinating UnitU24CA288185 · NCI · FRED HUTCHINSON CANCER CENTER · PI Wei Sun, Yingye Zheng · 2023 to 2026
$3.1M
Risk stratification strategies and abbreviated MRI-based surveillance for early detection of HCC in high-risk AI/AN patientsP20CA252732 · NCI · UNIVERSITY OF WASHINGTON · PI GRADY, WILLIAM MALLORY, IOANNOU, GEORGE · 2021 to 2023
$2.7M
Methods for Analyzing Cancer Somatic Mutation DataR01CA223498 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HE, QIANCHUAN · 2018 to 2022
$2.0M
NCI NIH HHS P20 CA252732NCI NIH HHS R01 CA223498NCI NIH HHS U24 CA086368NCI NIH HHS U24 CA230144NCI NIH HHS U24 CA288185NIEHS NIH HHS P30 ES007033NIGMS NIH HHS R01 GM105785
6 · The paper itself

Abstract

Background and Aims: Modeling hepatocellular carcinoma (HCC) risk in Alaska Native (AN) peoples with chronic hepatitis B virus (HBV) infection is important for risk stratification and surveillance. Existing HCC risk prediction models use baseline characteristics ascertained at the time of HBV diagnosis, rather than predicting HCC risk within 5 years of a relevant time point (such as a clinic visit), and do not include the HBV genotype (GT). We aimed to develop an HCC risk prediction model that addresses these limitations. Methods: We used longitudinal data from a cohort of 1163 AN peoples with HBV. We considered age, sex, GT, serum alpha fetoprotein (AFP), along with serum alanine transaminase, albumin, aspartate aminotransferase, bilirubin, hepatitis B-e-antigen, platelet count, and fibrosis 4 score. To build a 5-year risk model, we structured the longitudinal data into multiple 5-year segments, using AFP as the landmark biomarker. We used the generalized estimation equation approach as well as the Random Forest approach to build risk prediction models. Results: Among the 11 predictors included in our final models, AFP was the most important followed by platelet count and GT. Based on cross-validation, the generalized estimation equation model had an area under the receiver operating characteristic curve of 0.81, with 46.5% sensitivity at 90% specificity for 5-year HCC risk prediction. The Random Forest model was superior with an area under the receiver operating characteristic curve of 0.88 and 70% sensitivity at 90% specificity, outperforming the PAGE-B, mPAGE-B, REACH-B and REAL-B models. Conclusion: We developed an HCC risk prediction model using rich information from different time points in a patient's disease trajectory. Our model can accurately estimate HCC risk at different time points during follow-up for risk stratification and risk-based surveillance.

Indexed as

5-Year RiskAlaska NativeHBV GenotypeHepatocellular CarcinomaLongitudinal DataRisk Modeling

Identifiers

PMID40491440
PMCPMC12146542

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.