Evidence map›Paper›PMID 40489786›Full record

ArticleAnalytical chemistry2025

Top-Down Characterization of Yeast tRNA by Gas-Phase Fractionation and Collisionally Activated Dissociation Informed by Electron Photodetachment Charge Reduction Mass Spectrometry.

Michael B Lanzillotti, Jessica Pauling, Thanh Nguyen, Jennifer S Brodbelt

Abstract read
In one paragraph

Article in Analytical chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michael B LanzillottiDepartment of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.
Jessica PaulingDepartment of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.
Thanh NguyenDepartment of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.
Jennifer S BrodbeltDepartment of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States.ORCID 0000-0003-3207-0217

Funding

Ultraviolet Photodissociation Mass Spectrometry for Characterization of Biological MoleculesR35GM139658 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI BRODBELT, JENNIFER S. · 2021 to 2025
$2.9M
NIGMS NIH HHS R35 GM139658
6 · The paper itself

Abstract

Many transfer RNAs (tRNAs) are heavily modified and exhibit high sequence heterogeneity, making them challenging targets for characterization. Tandem mass spectrometry can interrogate multiple covalent modifications present on a single type of tRNA at the nucleotide level simultaneously. To expand the capacity of MS-based methods to determine co-occurring modifications, top-down methodologies that examine intact RNAs offer a compelling strategy. Here we report a gas-phase fractionation MS/MS method in which narrow segments of a mass spectrum are isolated and subjected to either ultraviolet (UV) photoactivation or collisionally activated dissociation (CAD). UV photoactivation causes charge reduction via electron photodetachment, dispersing the precursor ions over a broader

Indexed as

RNA, TransferSaccharomyces cerevisiaeChemical FractionationElectronsGasesPhotochemical ProcessesTandem Mass SpectrometryUltraviolet RaysGasesRNA, Transfer

Identifiers

PMID40489786
PMCPMC12286414

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.