Evidence map›Paper›PMID 40489609›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Motor-driven microtubule diffusion in a photobleached dynamical coordinate system.

Soichi Hirokawa, Heun Jin Lee, Rachel A Banks, Ana I Duarte, Bibi Najma, Matt Thomson, Rob Phillips

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Motor-driven microtubule diffusion in a photobleached dynamical coordinate system.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Soichi HirokawaDivision of Engineering and Applied Science, Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0001-5584-2676
Heun Jin LeeDivision of Engineering and Applied Science, Department of Applied Physics, California Institute of Technology, Pasadena, CA 91125.ORCID 0009-0002-4615-9271
Rachel A BanksDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.
Ana I DuarteDivision of Physics, California Institute of Technology, Pasadena, CA.ORCID 0000-0003-3726-3018
Bibi NajmaDivision of Physics, California Institute of Technology, Pasadena, CA.
Matt ThomsonDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.
Rob PhillipsDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0003-3082-2809

Funding

The Principles of Regulatory, Conformational and Evolutionary AdaptationR35GM118043 · NIGMS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ROB PHILLIPS · 2016 to 2026
$7.9M
HHS | National Institutes of Health (NIH) 1R35 GM118043HHS | National Institutes of Health (NIH) 2R35 GM118043NIGMS NIH HHS R35 GM118043
6 · The paper itself

Abstract

A hallmark feature of active matter systems is the ability of individual elements to interact and organize over length scales exceeding that of the constituent molecular players. However, the nature of internal redistribution that occurs in the bulk of the collective is less clear. Using light-dimerizable kinesin motors to spatially control the formation and contraction of a microtubule network, we deliberately photobleach a grid pattern onto the filament network serving as a transient and dynamic coordinate system to observe the deformation and translation of the remaining fluorescent squares of microtubules. We find that the network contracts at a rate set by motor speed but is accompanied by a diffusive-like spread throughout the bulk of the contracting network with effective diffusion constant two orders of magnitude lower than that for freely diffusing microtubules. We further find that on micron scales, the diffusive timescale is only a factor of ≈3 slower than that of advection regardless of conditions, showing that the global contraction and long-time relaxation from this diffusive behavior are both motor-driven but exhibit local competition within the network bulk.

Indexed as

active mattercytoskeletonphotobleaching

Identifiers

PMID40489609
PMCPMC12184364

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.