Evidence map›Paper›PMID 40489058›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2025

Accumulation of Epigenetic Noise in the Aging Corneal Epithelium and Its Possible Mechanism.

Galina Dvoriantchikova, Michelle Fleishaker, Dmitry Ivanov

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Galina DvoriantchikovaBascom Palmer Eye Institute, Department of Ophthalmology, University of Miami Miller School of Medicine, Miami, Florida, USA.ORCID https://orcid.org/0009-0006-8985-3799
Michelle FleishakerBascom Palmer Eye Institute, Department of Ophthalmology, University of Miami Miller School of Medicine, Miami, Florida, USA.ORCID https://orcid.org/0009-0003-8076-2944
Dmitry IvanovBascom Palmer Eye Institute, Department of Ophthalmology, Department of Microbiology and Immunology, University of Miami Miller School of Medicine, Miami, Florida, USA.ORCID https://orcid.org/0000-0002-5573-4402

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Victor L Perez · 2004 to 2026
$12.2M
NEI NIH HHS P30 EY014801Research to Prevent Blindness (RPB) GR004596 -1
6 · The paper itself

Abstract

The cornea is the eye's "window" and plays an important role in vision. Aging has a substantial impact on corneal function by reducing the ability of corneal cells to protect the eye, refract light, and repair itself. In this study, we investigated DNA methylation patterns and the activity of the DNMT and TET families, which are responsible for shaping these patterns, in the aging corneal epithelium. To this end, we used corneal epithelial cell sheets detached from the corneas of 2- and 14-month-old mice to study gene expression, DNA methylation, and DNA hydroxymethylation. We detected significant changes in gene expression in aging corneal epithelial cells. Our data indicate that aging leads to significant changes in the methylation of individual cytosines and large DNA regions, which were similar to those shown for other aging tissues. We observed reduced expression of genes from the DNMT and TET families and reduced DNA hydroxymethylation levels in the corneal epithelium of 14-month-old mice compared to 2-month-old mice. These data indicate that the activity of TET enzymes is reduced in the corneal epithelium during aging. Thus, we found an accumulation of epigenetic noise in the aging corneal epithelium, manifested by increases and decreases in DNA methylation levels, which may be caused by decreased activity of TET enzymes. We propose that the observed age-related changes in the corneal epithelium reflect epigenetic changes occurring in the limbal epithelial stem cells.

Indexed as

AgingDNA MethylationEpigenesis, GeneticEpithelium, CornealAnimalsDNA (Cytosine-5-)-MethyltransferasesEpithelial CellsMiceMice, Inbred C57BLDNA (Cytosine-5-)-Methyltransferasesagingcorneacorneal epitheliumDNA HydroxymethylationDNA methylationepigenetic noiseepigeneticslimbal epithelial stem cellsTET enzymes

Identifiers

PMID40489058
PMCPMC12147993

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.