Evidence map›Paper›PMID 40487918›Full record

ArticleISME communications2025

Bacterial and fungal composition and exometabolites control the development and persistence of soil water repellency.

Emily N Boak, Benjamin P Bowen, Katherine B Louie, Trent R Northen, Marie E Kroeger

Abstract read
In one paragraph

Article in ISME communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Emily N BoakMicrobial and Biome Sciences Group, Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545, United States.
Benjamin P BowenGenomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.
Katherine B LouieDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.
Trent R NorthenGenomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.
Marie E KroegerMicrobial and Biome Sciences Group, Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soil water repellency (SWR), the reduced affinity of soil for water, is a phenomenon that affects soils globally. With worsening climate change, SWR is expected to increase emphasizing the need to understand the mechanisms driving SWR development and persistence. The importance of the soil microbes in SWR has been postulated for decades, but limited research has been conducted into whole-community interactions and the role of community metabolic activity. To address this gap in knowledge, we investigated the direct effect of microbial community composition, activity, and diversity, as well as their associated metabolites on the development and persistence of SWR by inoculating microcosms containing model soils with 15 different microbial communities and quantified respiration and SWR over time. Six communities that consistently produced either a hydrophobic or hydrophilic phenotype were characterized using metagenomics and metabolomics to determine the impact of microbial and metabolite composition and diversity on SWR. We identified several bacterial genera with significant changes in abundance between SWR phenotypes including

Indexed as

metabolomicsmetagenomicsmodel ecosystemsoil microbiologysoil water repellency

Identifiers

PMID40487918
PMCPMC12143472

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.