Evidence map›Paper›PMID 40483364›Full record

ArticleCommunications biology2025

Costs of photosynthesis and cellular remodeling in trophic transitions of the unicellular red alga Galdieria partita.

Shota Yamashita, Shunsuke Hirooka, Takayuki Fujiwara, Baifeng Zhou, Fumi Yagisawa, Kei Tamashiro, Hiroki Murakami, Koichiro Awai, Shin-Ya Miyagishima

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shota YamashitaDepartment of Gene Function and Phenomics, National Institute of Genetics, Shizuoka, Japan. yamashii@nig.ac.jp.ORCID http://orcid.org/0000-0001-7478-5953
Shunsuke HirookaDepartment of Gene Function and Phenomics, National Institute of Genetics, Shizuoka, Japan.ORCID https://orcid.org/0000-0001-6247-8104
Takayuki FujiwaraDepartment of Gene Function and Phenomics, National Institute of Genetics, Shizuoka, Japan.ORCID https://orcid.org/0000-0001-6226-3955
Baifeng ZhouDepartment of Gene Function and Phenomics, National Institute of Genetics, Shizuoka, Japan.ORCID https://orcid.org/0009-0004-0561-0980
Fumi YagisawaResearch Facility Center, University of the Ryukyus, Okinawa, Japan.ORCID https://orcid.org/0000-0002-8534-3824
Kei TamashiroIntegrated Technology Center, University of the Ryukyus, Okinawa, Japan.
Hiroki MurakamiFaculty of Global Interdisciplinary Science and Innovation, Shizuoka University, Shizuoka, Japan.ORCID https://orcid.org/0000-0003-2635-2242
Koichiro AwaiFaculty of Science, Shizuoka University, Shizuoka, Japan.ORCID https://orcid.org/0000-0002-1731-7499
Shin-Ya MiyagishimaDepartment of Gene Function and Phenomics, National Institute of Genetics, Shizuoka, Japan. smiyagis@nig.ac.jp.ORCID http://orcid.org/0000-0002-9111-0832

Funding

MEXT | Japan Science and Technology Agency (JST) JPMJMI22E1MEXT | Japan Society for the Promotion of Science (JSPS) 22K15166MEXT | Japan Society for the Promotion of Science (JSPS) 24H00579MEXT | Japan Society for the Promotion of Science (JSPS) 24KJ0224
6 · The paper itself

Abstract

As in plastid differentiation in land plants, some unicellular algae reversibly remodel photosynthetic plastids into a colorless heterotrophic state (bleaching) in the presence of organic carbon sources. To understand these mechanisms and their significance, we performed comparative omics analyses on the photoautotrophic and heterotrophic states and their transitions in the genetically tractable red alga Galdieria partita. Photoautotrophic cells require 1.5, 1.3 and 1.7 times more nitrogen, protein, and fatty acids than heterotrophic cells. In the photoautotrophic cells, plastid- and nucleus-encoded proteins for photosynthesis are highly synthesized, while in the heterotrophic state, cytoplasmic and mitochondrial proteins are more abundant, enabling 1.6 times faster growth. Changes in non-plastid metabolic enzymes are limited, with some upregulated in the photoautotrophic state to support fatty acid and glycolipid synthesis in the plastid for thylakoid membranes. In contrast, solute transporters show broader changes. Bleaching occurs upon adding certain sugars or sugar alcohols, regardless of light, not by active digestion of photosynthetic machinery, but by dilution due to suppressed synthesis at the transcriptional level and faster cell growth. Thus, when assimilable organic carbon is available, the cells repress the synthesis of proteins, lipids, and pigments for photosynthesis, reallocating resources to promote faster growth.

Indexed as

PhotosynthesisRhodophytaCarbonHeterotrophic ProcessesPlastidsCarbon

Identifiers

PMID40483364
PMCPMC12145455

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.