Evidence map›Paper›PMID 40479734›Full record

ArticleThe journal of physical chemistry. B2025

A Trade-off between Force and Flow May Lead to Reduced Entropy Production Rate during Faster Microbial Growth.

Maarten J Droste, Maaike Remeijer, Robert Planqué, Frank J Bruggeman

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Maarten J DrosteDepartment of Mathematics, Amsterdam Center for Dynamics and Computation, Vrije Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands.ORCID 0009-0004-6259-2045
Maaike RemeijerSystems Biology Lab, A-LIFE, AIMMS, Vrije Universiteit Amsterdam, Amsterdam, 1081 HZ The Netherlands.ORCID 0009-0000-2781-6622
Robert PlanquéDepartment of Mathematics, Amsterdam Center for Dynamics and Computation, Vrije Universiteit Amsterdam, Amsterdam, 1081 HV, The Netherlands.
Frank J BruggemanSystems Biology Lab, A-LIFE, AIMMS, Vrije Universiteit Amsterdam, Amsterdam, 1081 HZ The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Thermodynamics dictates that the entropy production rate (EPR) of a steady-state isothermal chemical reaction network rises with reaction rates. Living cells can, in addition, alter reaction rates by changing enzyme concentrations, giving them control over metabolic activities. Here, we ask whether microbial cells can break this relation between EPR and reaction rates by shifting to a metabolism with lower thermodynamic driving force (per unit of biomass) at faster growth. First, we study an example metabolic network to illustrate that maximization of metabolic flux by optimal allocation of resources can indeed lead to selection of a pathway with a lower driving force. This pathway then compensates for the reduction in driving force by relying on fewer enzymes with sufficiently increased concentrations, resulting in a higher flux. Next, we investigate the EPR per unit biomass of microbes that change their catabolic network as a function of their growth rate, using three models for chemostat cultivation of the yeast

Indexed as

EntropySaccharomyces cerevisiaeBiomass

Identifiers

PMID40479734
PMCPMC12183760

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.