Evidence map›Paper›PMID 40479561›Full record

ArticlePlant physiology2025

Live-cell imaging of a plant virus replicase during infection using a genetically encoded, antibody-based probe.

Chiyusa Ishihara, Nobumitsu Sasaki, Yasuhiko Matsushita, Tomohiro Tsunoda, Tsutomu Arie, Richard S Nelson, Ken Komatsu

Abstract read
In one paragraph

Article in Plant physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chiyusa IshiharaGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.
Nobumitsu SasakiGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.ORCID 0000-0001-9202-5149
Yasuhiko MatsushitaGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.ORCID 0000-0003-3215-551X
Tomohiro TsunodaGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.
Tsutomu ArieGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.ORCID 0000-0002-4604-6608
Richard S NelsonDepartment of Entomology and Plant Pathology, Oklahoma State University, Stillwater, OK 74078, USA.ORCID 0000-0003-2086-6998
Ken KomatsuGraduate School of Agriculture, Tokyo University of Agriculture and Technology (TUAT), Fuchu, Tokyo 183-8509, Japan.ORCID 0000-0003-3323-7314

Funding

Grant for Basic Science Research Projects from the Sumitomo Foundation 210399Institute of Global Innovation Research at Tokyo University of Agriculture and TechnologyJapan Society for the Promotion of Sciences 23H02211
6 · The paper itself

Abstract

Replication of plant positive-strand RNA viruses occurs in association with intracellular membranes. To date, no versatile technology has been developed to directly label and visualize an active replicase in live plant cells because, in general, replicase function is not retained when it is fused to a protein for fluorescence imaging. We developed a technique to label and image a plant virus replicase during infection using the transiently expressed human influenza hemagglutinin (HA) frankenbody (FB), an antibody fragment that binds the HA epitope. The function of FB was demonstrated by visualizing the targeting of mCherry-fused FB (FB-mCherry) to an HA-tagged and GFP-fused endoplasmic reticulum (ER) marker protein in its native location. The combination of a two-component inducible system with the FB probe enabled FB-mCherry to label an HA epitope-tagged, functional replicase of Plantago asiatica mosaic virus (PlAMV) during its infection in Nicotiana benthamiana cells without affecting virus replication efficiency. The HA-tagged PlAMV replicase forms punctate structures associated with the ER and plasmodesmata and is localized in the vicinity of dsRNA, a hallmark of a viral replication complex. This application of epitope tag-binding intracellular probes for live subcellular imaging in plant cells offers insights into the localization dynamics of an active plant virus replicase during infection and the potential to co-localize host factors with the active replicase in situ.

Indexed as

Plant VirusesRNA-Dependent RNA PolymeraseViral Replicase Complex ProteinsEndoplasmic ReticulumLuminescent ProteinsNicotianaPlant DiseasesRecombinant Fusion ProteinsVirus ReplicationLuminescent ProteinsRecombinant Fusion ProteinsRNA-Dependent RNA PolymeraseViral Replicase Complex Proteins

Identifiers

PMID40479561
PMCPMC12205435

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.