Evidence map›Paper›PMID 40478444›Full record

SynthesisJournal of computer-aided molecular design2025

Evaluating computational and experimental approaches in early-stage Alzheimer's drug discovery: a systematic review.

Mahir Azmal, Jibon Kumar Paul, Md Naimul Haque Shohan, A N M Shah Newaz Been Haque, Mohua Mrinmoy, Omar Faruk Talukder, Ajit Ghosh

Abstract readSystematic Review
PubMed Publisher
In one paragraph

Synthesis in Journal of computer-aided molecular design, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mahir AzmalDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
Jibon Kumar PaulDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
Md Naimul Haque ShohanDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
A N M Shah Newaz Been HaqueDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
Mohua MrinmoyDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
Omar Faruk TalukderDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
Ajit GhoshDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh. aghosh-bmb@sust.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alzheimer's disease (AD) represents a significant global health challenge due to its complex pathophysiology and limited therapeutic options. Traditional drug discovery methods have had limited success, highlighting the need for innovative strategies. This systematic review evaluates the role of molecular docking, virtual screening, and molecular dynamics simulations in the early stages of AD drug discovery. This study reviewed 100 studies published between 2000 and 2024, focusing on computational approaches to identify and optimize drug candidates targeting key AD-related proteins, including acetylcholinesterase (AChE), β-secretase (BACE1), and tau. Both natural and synthetic compounds were examined, emphasizing studies integrating in silico methods with in vitro and in vivo validations. AChE was the most frequently targeted protein (23 studies), followed by BACE1 and multi-target approaches. The compounds investigated varied, with 35 studies focusing on natural products (e.g., quercetin, huperzine A) and 54 on synthetic analogs (e.g., tacrine derivatives). Integrating computational and experimental methods enhanced the validation process, providing comprehensive insights into the pharmacodynamics and pharmacokinetics of potential therapeutics. Computational approaches significantly expedite the identification and optimization of AD drug candidates by enabling the rapid screening of extensive compound libraries. These methods, when combined with experimental validations, offer deeper molecular-level insights into drug interactions and mechanisms. However, challenges such as predictive accuracy and data quality remain, necessitating further advancements in computational models and data integration to improve the predictability and effectiveness of AD therapeutics.

Indexed as

Alzheimer DiseaseDrug DiscoveryAcetylcholinesteraseAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBiological ProductsCholinesterase InhibitorsHumansMolecular Docking SimulationMolecular Dynamics Simulationtau ProteinsAcetylcholinesteraseAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBACE1 protein, humanBiological ProductsCholinesterase Inhibitorstau ProteinsAcetylcholinesterase inhibitorsAlzheimer’s diseaseMolecular dynamics simulationsSystemic reviewVirtual screening

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.