Evidence map›Paper›PMID 40478429›Full record

ArticleEnvironmental science and pollution research international2025

Hydrological regime and niche partitioning drive fungal community structure and function in arid wetlands sediments of South Africa.

Henry Joseph Oduor Ogola, Grace Nkechinyere Ijoma, Joshua Nosa Edokpayi

Abstract read
In one paragraph

Article in Environmental science and pollution research international, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Fungal Communities in Various Environments.Journal of fungi (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Henry Joseph Oduor OgolaDepartment of Environmental Sciences (DES), College of Agriculture and Environmental Sciences (CAES), University of South Africa (UNISA), Florida Campus, Roodepoort, 1709, South Africa. henryogola@gmail.com.ORCID http://orcid.org/0000-0003-1603-6430
Grace Nkechinyere IjomaDepartment of Environmental Sciences (DES), College of Agriculture and Environmental Sciences (CAES), University of South Africa (UNISA), Florida Campus, Roodepoort, 1709, South Africa.
Joshua Nosa EdokpayiWater and Environmental Management Research Group, Faculty of Science, Engineering and Agriculture, University of Venda, Thohoyandou, 0950, South Africa.

Funding

Department of Science and Innovation, South Africa DST/CON0197/2017
6 · The paper itself

Abstract

Arid wetlands are ecologically significant yet understudied ecosystems shaped by extreme conditions and hydrological variability. However, the structure and ecological functional of fungal communities in these habitats remain poorly understood, especially in southern Africa. This study integrated shotgun metagenomics, FUNGuild functional profiling, and multivariate analyses to examine fungal diversity, functional composition, and environmental drivers in seasonal and permanent arid wetlands of South Africa. Distinct fungal assemblages emerged, primarily shaped by hydrological regimes and ionic stress. Seasonal wetlands were dominated by Mucoromycota (79%), particularly arbuscular mycorrhizal (AM) fungus (Rhizophagus, 62%), while permanent wetlands had higher Ascomycota (54%), with Aspergillus (50%) prevalent in oxygen-limited sediments. Although alpha diversity showed no significant difference, beta diversity confirmed significant mycobiome differentiation. Total dissolved solids (TDS), electrical conductivity (EC), and salinity were key predictors of fungal composition, with TDS the strongest determinant (p < 0.01). Functional guild analysis highlighted niche differentiation, with saprotrophs dominating permanent wetlands (59.7% vs. 21.5%; p < 0.05), while symbiotrophs, particularly AM fungi, were enriched in seasonal wetlands (69.3% vs. 36.1%; p < 0.001). Indicator taxa identified via LefSe (LDA > 3, p < 0.05) and random forest modeling included Rhizophagus, Trichoderma, Fusarium, and Entomophthora in seasonal wetlands, and Aspergillus in permanent wetlands. This study provides the first integrative insight into fungal ecology in South Africa's arid wetlands, demonstrating that hydrological regime shapes fungal structure and function through environmental filtering and niche specialization, with implications for guiding conservation and adaptive management of these fragile ecosystems.

Indexed as

FungiGeologic SedimentsWetlandsBiodiversityEcosystemHydrologyMycobiomeMycorrhizaeSouth AfricaAscomycotaFungal communitiesHydrological variabilityMucoromycotaShotgun metagenomics

Identifiers

PMID40478429
PMCPMC12202646

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.