Evidence map›Paper›PMID 40476730›Full record

ArticleThe ISME journal2025

Trichodesmium metaproteomes reflect the differential influence of resource availability across ocean regions.

Hanna S Anderson, Kyle R Frischkorn, Sheean T Haley, Sonya T Dyhrman

Abstract read
In one paragraph

Article in The ISME journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hanna S AndersonDepartment of Earth and Environmental Sciences, Columbia University, New York, NY 10027, United States.ORCID 0000-0002-1497-3650
Kyle R FrischkornLamont-Doherty Earth Observatory, Columbia University, Palisades, NY 10964, United States.ORCID 0000-0003-3562-4000
Sheean T HaleyLamont-Doherty Earth Observatory, Columbia University, Palisades, NY 10964, United States.
Sonya T DyhrmanDepartment of Earth and Environmental Sciences, Columbia University, New York, NY 10027, United States.ORCID 0000-0003-2901-699X

Funding

National Science Foundation OCE-1332912Simons Foundation's Simons Collaboration on Ocean Processes and Ecology 721225
6 · The paper itself

Abstract

The diazotroph Trichodesmium is an important contributor to marine dinitrogen fixation, supplying nitrogen to phytoplankton in typically nitrogen-limited ocean regions. Identifying how iron and phosphorus influence Trichodesmium activity and biogeography is an ongoing area of study, where predicting patterns of resource stress is complicated by the uncertain bioavailability of organically complexed iron and phosphorus. Here, a comparison of 26 metaproteomes from picked Trichodesmium colonies identified significantly different patterns between three ocean regions: the western tropical South Pacific, the western North Atlantic, and the North Pacific Subtropical Gyre. Trichodesmium KEGG submodule signals differed significantly across regions, and vector fitting showed that dissolved iron, dissolved inorganic phosphorus, and temperature significantly correlated with regional metaproteome patterns. Patterns of iron and phosphorus stress marker proteins previously validated in culture studies showed significant enrichment of a phosphorus stress signal in the western North Atlantic and an iron stress signal in the North Pacific. Populations in the western tropical South Pacific appeared to modulate their proteomes in response to both dissolved iron and dissolved inorganic phosphorus bioavailability, with significant enrichment of iron and phosphorus stress marker proteins, concomitant proteome restructuring, and significant decreases in the relative abundance of the dinitrogen fixation protein, NifH. These signals recapitulate established regional patterns of resource stress on phytoplankton communities released from nitrogen stress. Evaluating community stress patterns may therefore predict resource controls on diazotroph biogeography. These data highlight how Trichodesmium modulates its metabolism in the field and provide an opportunity to more accurately constrain controls on Trichodesmium biogeography and dinitrogen fixation.

Indexed as

ProteomeSeawaterTrichodesmiumBacterial ProteinsIronNitrogen FixationOceans and SeasPacific OceanPhosphorusPhytoplanktonBacterial ProteinsIronPhosphorusProteomeco-limitationdiazotrophymetaproteomicsTrichodesmium

Identifiers

PMID40476730
PMCPMC12206446

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.