Evidence map›Paper›PMID 40474086›Full record

ArticleBMC genomics2025

Investigation of high fecundity genes by nanopore sequencing in sheep (Ovis aries) pituitary.

Xue Xiao, Zhibin Ji, Tong Wang, Dejie Zhu, Zhonghui Li, Xinming Xu, Fen Li

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Genomic insights into the recent evolution and biodiversity of Italian sheep breeds.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xue XiaoKey Laboratory of Efficient Utilization of Non-grain Feed Resources (Co- construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shandong Provincial Key Laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, China.
Zhibin JiKey Laboratory of Efficient Utilization of Non-grain Feed Resources (Co- construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shandong Provincial Key Laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, China. zbji916@sdau.edu.cn.
Tong WangKey Laboratory of Efficient Utilization of Non-grain Feed Resources (Co- construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shandong Provincial Key Laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, China.
Dejie ZhuKey Laboratory of Efficient Utilization of Non-grain Feed Resources (Co- construction by Ministry and Province), Ministry of Agriculture and Rural Affairs, Shandong Provincial Key Laboratory for Livestock Germplasm Innovation & Utilization, College of Animal Science and Technology, Shandong Agricultural University, Taian, 271018, China.
Zhonghui LiInstitute of Animal biotechnology, Xinjiang Academy of Animal Sciences, Urumqi, 830026, China.
Xinming XuInstitute of Animal biotechnology, Xinjiang Academy of Animal Sciences, Urumqi, 830026, China.
Fen LiShandong Binzhou Animal Science & Veterinary Medicine Academy, Binzhou, 256600, China.

Funding

National Key Research and Development Program of China 2021YFD1200901
6 · The paper itself

Abstract

backgroundReproduction is a complex process, which is influenced by the inheritance of many minor genes and some major genes. The pituitary gland is an important endocrine organ that regulates estrus and reproduction in sheep mainly through hormone synthesis and secretion. Previous studies on reproduction traits have focused mainly on folliculogenesis and ovulation in sheep with different fecundities, and few systematic analyses of the mRNAs expressed in the pituitary have been performed. To explore the intrinsic molecular regulatory mechanisms and gene regulatory network of sheep reproductive traits, key genes affecting multiple fetal traits, such as ovulation number and litter size, were screened to provide a new reference for the study of reproduction traits in sheep.

resultIn this study, three healthy small-tailed Han sheep and three healthy Wadi sheep were selected respectively to form a high-reproduction group (small-tailed Han sheep, HP group) and a low-reproduction group (Wadi sheep, LP group). ONT full-length transcriptome sequencing technology was used for mRNA identification, screening, and functional analysis. A total of 7,123 DEGs were found between the two groups of sheep, including 3,551 genes that were upregulated and 3,572 genes that were downregulated in the HP group. The expression of screened genes PRKACB, MAPK1, CAMK2D, PIK3CB, GNAI3, RAC1, PTK2, ITGB1, PRKCB, MAPK10, and MAPK13 significantly differed between the HP and LP groups. GO and KEGG terms related to pituitary function and reproduction were enriched, including reproductive processes, responses to stimuli, and synapses, as well as the mTOR signaling pathway, PI3K-Akt signaling pathway, cAMP signaling pathway, ERK1/2 signaling pathways and MAPK signaling pathways.

conclusionsOur results clearly indicate that the DEGs detected were involved in the development of morphology and structure of tissues and organs, as well as the secretion of hormones in the endocrine system, which could provide a scientific basis for elucidating the genetic mechanisms of high reproduction in sheep.

Indexed as

FertilityPituitary GlandAnimalsFemaleGene Expression ProfilingGene Regulatory NetworksSheepTranscriptomeDifferential expression analysisFecundityNanopore technologyPituitarySequencingSheep

Identifiers

PMID40474086
PMCPMC12143060

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.