Evidence map›Paper›PMID 40474005›Full record

ArticleThe EMBO journal2026

Co-evolving infectivity and expression patterns drive the diversification of endogenous retroviruses.

Kirsten-André Senti, Baptiste Rafanel, Dominik Handler, Carolin Kosiol, Christian Schlötterer, Julius Brennecke

Abstract read
In one paragraph

Article in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Lifestyles ofProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Life science alliance · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. PervasivebioRxiv : the preprint server for biology · 2025
    Article
  10. Recent horizontal transfer of transposable elements inbioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. The ongoing invasion of the endogenous retrovirusbioRxiv : the preprint server for biology · 2025
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kirsten-André SentiInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, 1030, Vienna, Austria. senti@imba.oeaw.ac.at.ORCID http://orcid.org/0000-0002-7208-7593
Baptiste RafanelInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, 1030, Vienna, Austria.
Dominik HandlerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, 1030, Vienna, Austria.ORCID http://orcid.org/0000-0002-1059-4960
Carolin KosiolUniversity of St Andrews, Centre for Biological Diversity, St Andrews, Scotland, UK.ORCID http://orcid.org/0000-0002-3219-6648
Christian SchlöttererInstitut für Populationsgenetik, Vetmeduni Vienna, Veterinärplatz 1, 1210, Vienna, Austria.ORCID http://orcid.org/0000-0003-4710-6526
Julius BrenneckeInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Dr. Bohr-Gasse 3, 1030, Vienna, Austria. julius.brennecke@imba.oeaw.ac.at.ORCID http://orcid.org/0000-0002-5141-0814

Funding

Austrian Academy of Sciences DOC FellowshipAustrian Science Fund (FWF) P32935Austrian Science Fund (FWF) P33715-BEC | ERC | HORIZON EUROPE European Research Council (ERC) ArchAdaptUKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/W000768/1Vienna Science and Technology Fund (WWTF) 10.47379/MA16061
6 · The paper itself

Abstract

Transposable elements are major contributors to the evolution of their hosts, but the mechanisms driving their own diversification remain poorly understood. Here, we reveal key principles governing the evolution of insect endogenous retroviruses (ERVs), a class of infectious LTR-retrotransposons that encode an Envelope protein. Through comparative analyses and experimental studies of transposon replication cycles in Drosophila, we demonstrate how two crucial ERV traits-infectivity and spatiotemporal expression-co-evolve. We find that ERVs have adapted their cis-regulatory sequences to function across all ovarian cell types. Strikingly, infectious ERV lineages display distinct expression patterns in somatic cells, from where they infect the germline, whereas derived retroelement lineages that have lost infectivity are expressed exclusively in the germline. Co-evolutionary changes in the piRNA pathway, which integrates transposon promoter and sequence information into differentially expressed piRNA clusters, highlight the functional significance of the diverse ERV expression niches. By investigating a unique ERV lineage, rover, we reconstruct the molecular events that transformed an infectious ERV into a retroelement. Overall, our study uncovers fundamental mechanisms that drive the co-evolution of ERVs and their hosts, with important implications for understanding the functional diversification of LTR sequences.

Indexed as

Drosophila melanogasterEndogenous RetrovirusesEvolution, MolecularGene Expression Regulation, ViralAnimalsDNA Transposable ElementsDrosophilaFemaleRetroelementsRNA, Small InterferingDNA Transposable ElementsRetroelementsRNA, Small InterferingDrosophila Germline BiologyEndogenous RetrovirusespiRNA Cluster EvolutionPIWI/piRNA PathwayTransposon Evolution

Identifiers

PMID40474005
PMCPMC12992720

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.