Evidence map›Paper›PMID 40473621›Full record

ArticleTranslational psychiatry2025

Sex and regional differences in gene expression across the striatum in psychosis.

Megan S Perez, RuoFei Yin, Madeline R Scott, Wei Zong, Marianne L Seney, Xiangning Xue, Mariah A Hildebrand, Vaishnavi G Shankar, Jill R Glausier, David A Lewis and 3 more

Abstract read
In one paragraph

Article in Translational psychiatry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Megan S PerezDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
RuoFei YinDepartment of Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.ORCID http://orcid.org/0009-0005-4117-380X
Madeline R ScottDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Wei ZongDepartment of Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.
Marianne L SeneyDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-6401-9494
Xiangning XueDepartment of Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-5775-1193
Mariah A HildebrandDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Vaishnavi G ShankarDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Jill R GlausierDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0001-9838-3414
David A LewisDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-3225-6778
George C TsengDepartment of Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-5447-1014
Kyle D KetchesinDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA. ketchesinkd@upmc.edu.ORCID http://orcid.org/0000-0002-2861-5811
Colleen A McClungDepartment of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA. mcclungca@upmc.edu.ORCID http://orcid.org/0000-0003-4719-6197

Funding

Subject Management and BiobankingP50DA046346 · NIDA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Daniel J. Buysse, Colleen A McClung · 2020 to 2026
$23.4M
Identification of molecular rhythm changes in postmortem tissue from individuals with psychiatric illness. R01MH111601 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Colleen A McClung, Marianne L Seney · 2018 to 2026
$5.5M
Role of NPAS2 in the nucleus accumbens in drug addictionR01DA039865 · NIDA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MCCLUNG, COLLEEN A · 2015 to 2024
$3.9M
Selective HDAC inhibition and therapeutic target genes: Identification of novel treatments for Bipolar DisorderR01MH106460 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MCCLUNG, COLLEEN A · 2016 to 2024
$3.6M
Investigating the bidirectional relationship between circadian rhythms and cannabinoid useR01DA061227 · NIDA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Kyle Ketchesin, Marianne L Seney · 2024 to 2026
$1.3M
Consequences of HDAC2 inhibition in VTA-NAc circuitryRF1MH106460 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MCCLUNG, COLLEEN A · 2025 to 2025
$1.0M
Role of DNA methylation in regulating striatal molecular rhythm alterations in depressionK01MH128763 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KETCHESIN, KYLE · 2021 to 2024
$680k
Role of Cell Type-Specific Molecular Rhythm Disruption in Alcohol Use DisorderR21AA031074 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KETCHESIN, KYLE, LOGAN, RYAN W · 2023 to 2023
$441k
Brain and Behavior Research Foundation (Brain & Behavior Research Foundation) 30823NIAAA NIH HHS R21 AA031074NIDA NIH HHS P50 DA046346NIDA NIH HHS R01 DA039865NIDA NIH HHS R01 DA061227NIMH NIH HHS K01 MH128763NIMH NIH HHS R01 MH106460NIMH NIH HHS R01 MH111601NIMH NIH HHS RF1 MH106460U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) MH106460U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) MH111601U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) MH128763U.S. Department of Health & Human Services | NIH | National Institute on Alcohol Abuse and Alcoholism (NIAAA) AA031074U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) DA039865U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) DA046346U.S. Department of Health & Human Services | NIH | National Institute on Drug Abuse (NIDA) DA061227
6 · The paper itself

Abstract

Psychosis is a hallmark symptom of schizophrenia and highly prevalent in bipolar disorder. Previous work has shown altered gene expression within subregions of the striatum in subjects with psychosis, but it is unclear if these alterations differ across subregions. Moreover, despite known sex differences in the presentation of psychosis (such as age of onset and disease course), it is unclear if there are sex differences in gene expression across subregions of the human striatum in the context of psychosis. Using RNA-sequencing data from human postmortem nucleus accumbens (NAc), caudate, and putamen, we first performed differential expression analyses across these striatal subregions in unaffected (n = 60) and psychosis (n = 36) subjects. For analysis of sex differences, we used equal numbers of males and females in each subject group and evaluated sex and psychosis effects within each brain region. We found that the NAc is the most transcriptionally unique region compared to the caudate and the putamen in both psychosis and unaffected subjects. We also found distinct patterns in gene expression across the three striatal subregions, with an altered pattern of cilia-related genes in subjects with psychosis. Our sex-based analyses showed a striking discordant expression pattern, with opposite effect directions between male and female subjects with psychosis in all three subregions, including a reversal of sex differences in immune- and angiogenesis-related pathways. Overall, we identified regional and sex differences in gene expression across the human striatum that may underlie sex-specific striatal dysfunction and symptomatology in psychosis.

Indexed as

Corpus StriatumGene ExpressionPsychotic DisordersSchizophreniaSex CharacteristicsAdultCaudate NucleusFemaleHumansMaleMiddle AgedNucleus AccumbensPutamenSex Factors

Identifiers

PMID40473621
PMCPMC12141710

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.