Evidence map›Paper›PMID 40469543›Full record

ArticleGigaByte (Hong Kong, China)2025

Chromosome-level genome assembly of the lemon sole,

Marcel Nebenführ, David Prochotta, Maria A Nilsson, Menno J de Jong, Tunca D Yazici, Fabienne Langefeld, Malambo Muloongo, Helena Woköck, Jakob Jilg, Sina C Bender and 5 more

Abstract read
In one paragraph

Article in GigaByte (Hong Kong, China), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Chromosome-level genome assembly of the lemon sole,GigaByte (Hong Kong, China) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Marcel NebenführSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0001-8802-2105
David ProchottaSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0000-6275-7752
Maria A NilssonSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0002-8136-7263
Menno J de JongSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0003-2131-9048
Tunca D YaziciSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0007-4341-3824
Fabienne LangefeldInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0003-8523-4665
Malambo MuloongoDepartment of Aquaculture & Fisheries Management, University of Ibadan, Nigeria.ORCID https://orcid.org/0000-0003-0220-1474
Helena WoköckInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0000-3322-1780
Jakob JilgInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0002-9910-4146
Sina C BenderInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0002-5800-5384
Marvin M ZanglInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0003-8108-9181
Juan-Manuel Ortega GuatameLOEWE-Centre for Translational Biodiversity Genomics (TBG), Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0009-8231-6191
Kimberley WilliamsInstitute for Ecology, Evolution, and Diversity, Goethe University, Frankfurt am Main, Germany.ORCID https://orcid.org/0009-0008-9521-0989
Moritz SonnewaldSenckenberg Research Institute, Department of Marine Zoology, Section Ichthyology, Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0003-3042-8107
Axel JankeSenckenberg Biodiversity and Climate Research Centre (BiK-F), Frankfurt am Main, Germany.ORCID https://orcid.org/0000-0002-9394-1904

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The lemon sole ( Findings: Here, we present a chromosome-level genome assembly of the lemon sole. We applied PacBio HiFi sequencing on the PacBio Revio system to generate a highly complete and contiguous reference genome.The resulting assembly has a contig N50 of 17.2 Mbp and a scaffold N50 of 27.2 Mbp. The total assembly length is 628 Mbp, comprising 24 chromosome-length scaffolds. The identification of 99.7% complete BUSCO genes indicates a high level of assembly completeness. Conclusions: The chromosome-level genome assembly of the lemon sole provides a high-quality reference genome for future population-level genomic analyses of this commercially valuable, edible fish.

Identifiers

PMID40469543
PMCPMC12135936

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.