Evidence map›Paper›PMID 40468430›Full record

ArticleEnvironmental microbiome2025

Pigeon pea-mediated soil microbial shifts improve agroecosystem multifunctionality in long-term maize-palisade grass intercropping.

Ahmad Nuruddin Khoiri, Nídia Raquel Costa, Carlos Alexandre Costa Crusciol, Cristiano Magalhães Pariz, Ciniro Costa, Juliano Carlos Calonego, André Michel de Castilhos, Daniel Martins de Souza, Paulo Roberto de Lima Meirelles, Igor Vilela Cru and 3 more

Abstract read
In one paragraph

Article in Environmental microbiome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ahmad Nuruddin Khoiri *Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, the Netherlands.
Nídia Raquel Costa *Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, the Netherlands.
Carlos Alexandre Costa CrusciolCollege of Agricultural Sciences, Department of Crop Science, São Paulo State University (UNESP), Botucatu, São Paulo, 18610-034, Brazil.
Cristiano Magalhães ParizCollege of Veterinary Medicine and Animal Science, Department of Animal Nutrition and Breeding, São Paulo State University (UNESP), Botucatu, São Paulo, 18618-681, Brazil.
Ciniro CostaCollege of Veterinary Medicine and Animal Science, Department of Animal Nutrition and Breeding, São Paulo State University (UNESP), Botucatu, São Paulo, 18618-681, Brazil.
Juliano Carlos CalonegoCollege of Agricultural Sciences, Department of Crop Science, São Paulo State University (UNESP), Botucatu, São Paulo, 18610-034, Brazil.
André Michel de CastilhosCollege of Veterinary Medicine and Animal Science, Department of Animal Nutrition and Breeding, São Paulo State University (UNESP), Botucatu, São Paulo, 18618-681, Brazil.
Daniel Martins de SouzaCollege of Veterinary Medicine and Animal Science, Department of Animal Nutrition and Breeding, São Paulo State University (UNESP), Botucatu, São Paulo, 18618-681, Brazil.
Paulo Roberto de Lima MeirellesCollege of Veterinary Medicine and Animal Science, Department of Animal Nutrition and Breeding, São Paulo State University (UNESP), Botucatu, São Paulo, 18618-681, Brazil.
Igor Vilela CruCollege of Agricultural Sciences, Department of Crop Science, São Paulo State University (UNESP), Botucatu, São Paulo, 18610-034, Brazil.
Luiz Gustavo MorettiDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, the Netherlands.
João William BossolaniDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, the Netherlands.
Eiko Eurya KuramaeDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, 6708 PB, the Netherlands. E.Kuramae@nioo.knaw.nl.

Funding

Fundação Agrisus 1378/14National Council for Scientific and Technological Development (CNPq) #458225/2014-2São Paulo Research Foundation (FAPESP) #2014/21772-4 and #2014/14935-4
6 · The paper itself

Abstract

backgroundIntercropping systems enhance agricultural sustainability by promoting ecosystem multifunctionality (EMF). This study examined the impact of adding pigeon pea (M + PG + PP) into a maize-palisade grass (M + PG) intercropping system under a no-till system (NTS) on soil microbial communities and ecosystem services. After five consecutive growing seasons, bulk soil samples from a soybean-based crop-livestock system were analyzed using metagenomics.

resultsThe inclusion of pigeon pea significantly improved the EMF index, with higher plant productivity and slightly enhanced outcomes in soil health, lamb meat productivity, and climate protection. The M + PG + PP treatment enriched Bradyrhizobium spp., which were positively correlated with soil health, plant productivity, and EMF index. Functional analysis indicated that M + PG + PP treatment enhanced nitrogen metabolism, biofilm formation, and exopolysaccharide (EPS) biosynthesis, improving soil fertility and microbial activity. Similarly, functional analysis of microbial plant growth-promoting traits revealed that the M + PG + PP treatment promoted microbial functions related to nitrogen and iron acquisition, sulfur assimilation, and plant colonization, all essential for plant growth and nutrient cycling. In contrast, the M + PG treatment primarily enhanced pathways related to competitive exclusion and phytohormone production.

conclusionsThese findings highlight the importance of incorporating legumes such as pigeon pea into intercropping systems to optimize ecosystem services, enhance soil health, and promote long-term agricultural productivity and sustainability.

Indexed as

Cajanus cajanCrop-livestock integrationlegume-Bradyrhizobium interactionShotgun metagenomicsSoil fertilitySustainable agriculture

Identifiers

PMID40468430
PMCPMC12139364

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.