Evidence map›Paper›PMID 40468066›Full record

ArticleNature2025

Concurrent loss of the Y chromosome in cancer and T cells impacts outcome.

Xingyu Chen, Yiling Shen, Suhyeon Choi, Hany A Abdel-Hafiz, Mukta Basu, Lena Hoelzen, Martina Tufano, Saravana Kumar Kailasam Mani, Maryam Ranjpour, Jiani Zhu and 5 more

Abstract read
In one paragraph

Article in Nature, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Sex-Biased Immunity: The Hidden Variable in Immuno-oncology.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Loss of NCCRP1 overcomes immune evasion in lung adenocarcinoma.Journal for immunotherapy of cancer · 2026
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Xingyu ChenDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0002-9284-4950
Yiling Shen *Department of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Suhyeon Choi *Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Hany A Abdel-HafizDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0002-5402-5540
Mukta BasuDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Lena HoelzenDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Martina TufanoDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0002-7907-0313
Saravana Kumar Kailasam ManiDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Maryam RanjpourDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Jiani ZhuDepartment of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0001-5951-5584
V Krishnan RamanujanDepartment of Pathology and Laboratory Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Ekaterina K KoltsovaDepartment of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0001-9872-9905
Vinicius F CalsavaraDepartment of Computational Biomedicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.ORCID 0000-0003-2332-5863
Simon R V KnottDepartment of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, CA, USA. simon.knott@cshs.org.ORCID 0000-0002-4018-7653
Dan TheodorescuDepartment of Urology, Cedars-Sinai Medical Center, Los Angeles, CA, USA. theodorescu@arizona.edu.ORCID 0000-0002-8708-8206

Funding

UCLA Clinical Translational Science InstituteUL1TR001881 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARLEEN F. BROWN, ARASH NAEIM · 2016 to 2026
$118.1M
The Role of the Y Chromosome in Bladder Tumor Development, Growth And ProgressionP01CA278732 · NCI · CEDARS-SINAI MEDICAL CENTER · PI Hany Abdel-Malek Abdel-Hafiz · 2023 to 2026
$10.7M
IL-27R signaling as a negative regulator of innate and adaptive anti-cancer immunity in hepatocellular carcinomaR01CA273925 · NCI · CEDARS-SINAI MEDICAL CENTER · PI KOLTSOVA, EKATERINA · 2022 to 2025
$3.3M
NCATS NIH HHS UL1 TR001881NCI NIH HHS P01 CA278732NCI NIH HHS R01 CA273925
6 · The paper itself

Abstract

Loss of the Y chromosome (LOY) in peripheral blood mononuclear cells (PBMCs) is the most common somatic alteration in men and is associated with higher mortality from epithelial cancers

Indexed as

CD8-Positive T-LymphocytesChromosomes, Human, YNeoplasmsT-LymphocytesAnimalsCD4-Positive T-LymphocytesEpithelial CellsFemaleHumansLeukocytes, MononuclearMaleMiceSingle-Cell Analysis

Identifiers

PMID40468066
PMCPMC12221978

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.