Evidence map›Paper›PMID 40468059›Full record

ArticleApplied microbiology and biotechnology2025

Growth and gene expression of Pseudomonas nitroreducens TX1 on octylphenol polyethoxylate surfactants.

Lam Dinh Bui, Po-Chun Tsai, Tuan Ngoc Nguyen, Chih-Chen Chen, Shir-Ly Huang

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lam Dinh BuiInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Taipei, 112304, Taiwan.ORCID http://orcid.org/0009-0000-7895-3918
Po-Chun TsaiInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Taipei, 112304, Taiwan.ORCID http://orcid.org/0009-0007-9053-1970
Tuan Ngoc NguyenGroup of Applied Research in Advanced Materials for Sustainable Development, Faculty of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, 700000, Vietnam.ORCID http://orcid.org/0000-0002-1865-6628
Chih-Chen ChenInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Taipei, 112304, Taiwan.ORCID http://orcid.org/0009-0000-9302-7621
Shir-Ly HuangInstitute of Microbiology and Immunology, National Yang Ming Chiao Tung University, Taipei, 112304, Taiwan. sl.huang@nycu.edu.tw.ORCID https://orcid.org/0000-0002-9252-1289

Funding

Ministry of Science and Technology, Taiwan MOST106-2320-B-010-020-MY3Ministry of Science and Technology, Taiwan MOST109-2320-B-010-010-MY3
6 · The paper itself

Abstract

Pseudomonas nitroreducens ATCC PTA-6168 (also named TX1) efficiently grows on non-ionic surfactants as the sole source of carbon and energy aerobically. The global gene expression and bacterial stress responses during degradation remain further investigated. This study compared the growth, viability, and transcriptomic profiles of strain TX1 during the log phase when grown on minimal salts basal medium supplemented with 0.5% octylphenol polyethoxylates (OPEO

Indexed as

Gene Expression Regulation, BacterialPhenolsPseudomonasSurface-Active AgentsBacterial ProteinsCulture MediaGene Expression ProfilingMicrobial ViabilityTranscriptomeBacterial ProteinsCulture MediaoctylphenolPhenolsSurface-Active AgentsAlcohol dehydrogenaseDifferentially expressed genesEthanol oxidation systemOctylphenol polyethoxylatesPseudomonas nitroreducensTranscriptomic analysis

Identifiers

PMID40468059
PMCPMC12137402

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.