Evidence map›Paper›PMID 40467614›Full record

ArticleNature communications2025

A multisensor high-temperature signaling framework for triggering daytime thermomorphogenesis in Arabidopsis.

De Fan, Wei Hu, Nan Xu, Ethan R Seto, John Clark Lagarias, Xuemei Chen, Meng Chen

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Artificial soil (ArtSoil): Recreating soil conditions in synthetic plant growth media.The Plant journal : for cell and molecular biology · 2026
    Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

De FanDepartment of Botany and Plant Sciences, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA.ORCID http://orcid.org/0009-0001-9154-8949
Wei HuDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0001-9602-1428
Nan XuDepartment of Botany and Plant Sciences, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA.
Ethan R SetoDepartment of Botany and Plant Sciences, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA.
John Clark LagariasDepartment of Molecular and Cellular Biology, University of California, Davis, CA, USA.ORCID http://orcid.org/0000-0002-2093-0403
Xuemei ChenDepartment of Botany and Plant Sciences, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA. xuemei.chen@pku.edu.cn.ORCID http://orcid.org/0000-0002-5209-1157
Meng ChenDepartment of Botany and Plant Sciences, Institute for Integrative Genome Biology, University of California, Riverside, CA, USA. meng.chen@ucr.edu.ORCID http://orcid.org/0000-0003-0351-5897

Funding

Genetic Characterization of Phytochrome Nuclear Bodies in Plant Light SignalingR01GM087388 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI CHEN, MENG · 2010 to 2023
$5.8M
Mechanism of nucleus-to-plastid light signaling in controlling plastid transcriptionR01GM132765 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Meng Chen · 2020 to 2026
$2.3M
UNDERSTANDING AND LEVERAGING MOLECULAR DIVERSITY WITHIN THE PHYTOCHROME SUPERFAMILYR35GM139598 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LAGARIAS, JOHN CLARK · 2021 to 2025
$2.0M
NIGMS NIH HHS R01 GM087388NIGMS NIH HHS R01 GM132765NIGMS NIH HHS R35 GM139598NSF | BIO | Division of Molecular and Cellular Biosciences (MCB) MCB-2141560United States Department of Agriculture | Agricultural Research Service (USDA Agricultural Research Service) CA-R-BPS-5186-HU.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM087388U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM132765U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM139598
6 · The paper itself

Abstract

The phytochrome B (phyB) photoreceptor and EARLY FLOWERING 3 (ELF3) are two major plant thermosensors that monitor high temperatures primarily at night. However, high temperatures naturally occur during the daytime; the mechanism of daytime thermosensing and whether these thermosensors can also operate under intense sunlight remain ambiguous. Here, we show that phyB plays a substantial role in daytime thermosensing in Arabidopsis, and its thermosensing function becomes negligible only when the red light intensity reaches 50 μmol m

Indexed as

ArabidopsisArabidopsis ProteinsPhytochrome BSignal TransductionThermosensingBasic Helix-Loop-Helix ProteinsChloroplastsGene Expression Regulation, PlantHot TemperatureLightStarchSucroseTranscription FactorsVernalizationArabidopsis ProteinsAt2g25930 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsPHYB protein, ArabidopsisPhytochrome BPIF4 protein, ArabidopsisStarchSucroseTranscription Factors

Identifiers

PMID40467614
PMCPMC12137955

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.