Evidence map›Paper›PMID 40464684›Full record

ArticleNucleic acids research2025

Single-cell imaging of N4-acetylcytidine-modified RNA using fluorine metabolic labeling mediated proximity ligation assay.

Qi Wang, Yuhao Du, Shen Yan, Ziang Lu, Yongling Tang, Feng Xiao, Fuling Zhou, Xiang Zhou

Erratum issuedAbstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Qi WangDepartment of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan 430071, China.ORCID 0000-0002-4950-458X
Yuhao DuCollege of Chemistry and Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China.
Shen YanCollege of Chemistry and Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China.
Ziang LuCollege of Chemistry and Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China.ORCID 0000-0001-9195-3082
Yongling TangCollege of Chemistry and Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China.
Feng XiaoCollege of Chemistry and Molecular Sciences, Wuhan University, Wuhan, Hubei 430072, China.ORCID 0000-0001-7163-9790
Fuling ZhouDepartment of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan 430071, China.
Xiang ZhouDepartment of Hematology of Zhongnan Hospital, Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan 430071, China.ORCID 0000-0002-1829-9368

Funding

China Postdoctoral Science Foundation 2022M722454National Key R&D Program of China 2022YFA1303500National Key R&D Program of China 2023YFC3402200National Natural Science Foundation of China 82370176National Natural Science Foundation of China 92153303
6 · The paper itself

Abstract

N 4-Acetylcytidine (ac4C) is an emerging epitranscriptomic mark involved in regulating RNA stability, translation, and gene expression. Despite its emerging role in gene regulation and disease, current methods for in situ detection of ac4C-modified RNA lack sensitivity and specificity. To overcome these challenges, we developed fluorine metabolic labeling mediated proximity ligation assay (FMPLA), a method combining fluorine-based metabolic labeling with a proximity ligation assay for precise detection of newly synthesized fluoro-metabolically labeled ac4C sites. This approach enables high-sensitivity visualization of multiple RNA species, and provides insights into the abundance and spatial dynamics of ac4C-modified RNAs during the cell cycle and under chemotherapeutic stress. Additionally, FMPLA reveals distinct RNA modification patterns in drug-resistant cancer cells, highlighting its potential in studying functions and mechanisms of RNA ac4C modification.

Indexed as

CytidineFluorineRNARNA Processing, Post-TranscriptionalSingle-Cell AnalysisCell Line, TumorDrug Resistance, NeoplasmHumansCytidineFluorineN-acetylcytidineRNA

Identifiers

PMID40464684
PMCPMC12135178

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.