Evidence map›Paper›PMID 40464575›Full record

ArticleApplied and environmental microbiology2025

Xylanolytic metabolism is regulated by coordination of transcription factors XynR and XylR in extremely thermophilic

Mohamad J H Manesh, James R Crosby, Tunyaboon Laemthong, Ryan G Bing, Stefanie H Chen, Jason Vailionis, Tania N N Tanwee, Ying Zhang, Dmitry A Rodionov, Michael W W Adams and 1 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mohamad J H Manesh *Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.ORCID 0000-0003-2173-3046
James R Crosby *Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Tunyaboon LaemthongDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Ryan G BingDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.
Stefanie H ChenDepartment of Biological Sciences, North Carolina State University, Raleigh, North Carolina, USA.ORCID 0000-0002-9550-971X
Jason VailionisDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.
Tania N N TanweeSanford-Burnham-Prebys Med, Discovery Institute, La Jolla, California, USA.
Ying ZhangDepartment of Cell and Molecular Biology, University of Rhode Island, Kingston, Rhode Island, USA.ORCID 0000-0001-8759-0194
Dmitry A RodionovSanford-Burnham-Prebys Med, Discovery Institute, La Jolla, California, USA.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.ORCID 0000-0003-0881-8870
Robert M KellyDepartment of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, North Carolina, USA.ORCID 0000-0002-0639-3592

Funding

Molecular Biotechnology Training at North Carolina State UniversityT32GM008776 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI KELLY, ROBERT M · 2000 to 2019
$3.9M
NC STATE MOLECULAR BIOTECHNOLOGY TRAINING PROGRAM (MBTP)T32GM133366 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI Jason M. Haugh, Robert M Kelly · 2020 to 2026
$3.3M
Government of ThailandNIGMS NIH HHS T32 GM008776NIGMS NIH HHS T32 GM133366NIH HHS T32 GM008776-20, T32 GM133366-01U.S. Department of Agriculture 2018-67021-27716U.S. Department of Education P200A160061U.S. Department of Energy DE-SC0019391, DE-SC0022192
6 · The paper itself

Abstract

Global transcription factors (TFs) control metabolic processes in bacteria to efficiently utilize available carbon. The order

Indexed as

BacillotaBacterial ProteinsCaldicellulosiruptorGene Expression Regulation, BacterialTranscription FactorsXylansXyloseBacterial ProteinsTranscription FactorsXylansXyloseCaldicellulosiruptoralesfluorescence polarizationhemicelluloseHill coefficienttranscriptional regulator

Identifiers

PMID40464575
PMCPMC12285236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.