Evidence map›Paper›PMID 40463392›Full record

ArticleFrontiers in immunology2025

Single-cell transcriptomics in colorectal cancer uncover the potential of metastasis and immune dysregulation of a cell cluster overexpressed PRSS22.

Chengyuan Xu, Ziheng Zhou, Dongfei Zhu, Qingyun Zhang, Shoubin Zhong, Zhenhua Li

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Article in Frontiers in immunology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Chengyuan Xu *School of Medicine, Tongji University, Shanghai, China.
Ziheng Zhou *School of Medicine, Tongji University, Shanghai, China.
Dongfei ZhuThe Department of Cardiology, Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Qingyun ZhangDepartment of Oncology, WeiFang People's Hospital, Shandong Second Medical University, Weifang, Shandong, China.
Shoubin Zhong *Department of Oncology, WeiFang People's Hospital, Shandong Second Medical University, Weifang, Shandong, China.
Zhenhua Li *Department of Oncology, WeiFang People's Hospital, Shandong Second Medical University, Weifang, Shandong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Colorectal cancer (CRC) is one of the most common malignancies worldwide, and its complex pathogenesis and significant tumor cell heterogeneity remain major challenges. With the rapid development of single-cell sequencing technology, we can now delve deeper into the cellular composition and dynamic changes within the tumor microenvironment, revealing cellular interactions and their potential roles in tumorigenesis. Method: In this study, we systematically analyzed comprehensive single-cell RNA sequencing data from 25 colorectal cancer and 10 adjacent normal tissue samples. We explored the characteristics and biological significance of tumor cell subpopulations, performed quality control, dimensionality reduction, and cell type identification, and further investigated epithelial cell copy number variations, cell communication, and pseudotime analysis. Subsequently, Boruta feature selection algorithm was combined to identify prognosis related genes. The expression patterns, clinical significance and biological effects of Results: Our analysis found an epithelial cell subcluster with high expression of Conclusion: Our study has identified a cell subcluster that is closely linked to progression, immune dysregulation and prognosis in CRC, and we have also identified

Indexed as

Colorectal NeoplasmsGene Expression Regulation, NeoplasticTranscriptomeBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationFemaleGene Expression ProfilingHumansMaleMiddle AgedNeoplasm MetastasisPrognosisSingle-Cell AnalysisTumor MicroenvironmentBiomarkers, Tumorcolorectal cancerimmune dysregulationmetastasisprognosisPRSS22single-cell sequencing

Identifiers

PMID40463392
PMCPMC12130013

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.