Evidence map›Paper›PMID 40461510›Full record

ArticleScientific data2025

Transcriptome profile of early matured Macrobrachium rosenbergii (Giant Freshwater Prawn) from Taiwan.

Sofia Priyadarsani Das, Yu-Ru Lin, Yu-Sheng Wu, Chun-Hung Liu, Yeh-Fang Hu, Fan-Hua Nan

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sofia Priyadarsani DasDepartment of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan.
Yu-Ru LinDepartment of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan.
Yu-Sheng WuDepartment of Aquaculture, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Chun-Hung LiuDepartment of Aquaculture, National Pingtung University of Science and Technology, Pingtung, Taiwan.
Yeh-Fang HuDepartment of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan.
Fan-Hua NanDepartment of Aquaculture, National Taiwan Ocean University, Keelung, Taiwan. fhnan@mail.ntou.edu.tw.ORCID http://orcid.org/0000-0003-4133-7171

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Macrobrachium rosenbergii, the Giant Freshwater Prawn (GFP), is one of the most commonly cultivated prawn species in Asia. The degradation of germplasm and the rise of viral infections like Infectious Precocity Virus (IPV) are two main issues that M. rosenbergii aquaculture has had to deal with recently. Therefore, a transcriptome sequencing of the assembled reads of M. rosenbergii from stage specific IPV infected early matured ovaries has been represented here. Approximately 64.63 million reads from Illumina Novaseq 6000 were generated from three different ovarian stages tissue assembled in Trinity assembler. The M. rosenbergii ovary yielded over 63.21 million clean paired end reads. Assembly generated a total of 108,974 transcripts and 51836 unigenes. Out of the total 51836 unigenes 32.31% (16,753) genes are curated with the help of the NCBI NR database. BUSCO confirmed 97.6% completeness to the high-quality assembly. This present study is an initiative to establish a transcriptome repository for stage specific IPV-infected M. rosenbergii from Taiwan. The information produced will be used as a foundation for transcriptome-based genetic research, which will provide fresh perspectives on the species' precocious puberty and diverse length distribution of this species.

Indexed as

PalaemonidaeTranscriptomeAnimalsFemaleOvaryTaiwan

Identifiers

PMID40461510
PMCPMC12134350

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.