Evidence map›Paper›PMID 40461486›Full record

ArticleNature communications2025

Realizing mechanical frustration at the nanoscale using DNA origami.

Anirudh S Madhvacharyula, Ruixin Li, Alexander A Swett, Yancheng Du, Seongmin Seo, Friedrich C Simmel, Jong Hyun Choi

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. A nanoscale Jitterbug transformer from DNA.Nature communications · 2026
    Article
  2. Review
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anirudh S MadhvacharyulaSchool of Mechanical Engineering, Purdue University, West Lafayette, IN, USA.ORCID http://orcid.org/0009-0008-3002-6953
Ruixin LiSchool of Mechanical Engineering, Purdue University, West Lafayette, IN, USA.
Alexander A SwettSchool of Materials Engineering, Purdue University, West Lafayette, IN, USA.ORCID http://orcid.org/0009-0007-3391-3614
Yancheng DuSchool of Mechanical Engineering, Purdue University, West Lafayette, IN, USA.
Seongmin SeoSchool of Mechanical Engineering, Purdue University, West Lafayette, IN, USA.ORCID http://orcid.org/0000-0002-9542-4425
Friedrich C SimmelPhysics of Synthetic Biological Systems, School of Natural Sciences, Technical University of Munich, Garching, Germany.ORCID http://orcid.org/0000-0003-3829-3446
Jong Hyun ChoiSchool of Mechanical Engineering, Purdue University, West Lafayette, IN, USA. jchoi@purdue.edu.ORCID http://orcid.org/0000-0002-0507-3052

Funding

DOE | SC | Basic Energy Sciences (BES) DE-SC0020673
6 · The paper itself

Abstract

Structural designs inspired by physical and biological systems have been previously utilized to develop mechanical metamaterials with enhanced properties based on clever geometric arrangement of constituent building blocks. Here, we use the DNA origami method to realize a nanoscale metastructure exhibiting mechanical frustration, a counterpart of the well-known phenomenon of magnetic frustration. By selectively actuating reconfigurable struts, it adopts either frustrated or non-frustrated states, each characterized by distinct free energy profiles. While the non-frustrated state distributes the strain homogeneously, the frustrated mode concentrates it at a specific location. Molecular dynamics simulations reconcile the contrasting behaviors and provide insights into underlying mechanics. We explore the design space further by tailoring responses through structural modifications. Our work combines programmable DNA self-assembly with mechanical design principles to overcome engineering limitations encountered at the macroscale to design dynamic, deformable nanostructures with potential applications in elastic energy storage, nanomechanical computation, and allosteric mechanisms in DNA-based nanomachinery.

Indexed as

DNANanostructuresNanotechnologyMolecular Dynamics SimulationNucleic Acid ConformationDNA

Identifiers

PMID40461486
PMCPMC12134127

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.