Evidence map›Paper›PMID 40460418›Full record

ArticleJMIR AI2025

High-Throughput Phenotyping of the Symptoms of Alzheimer Disease and Related Dementias Using Large Language Models: Cross-Sectional Study.

You Cheng, Mrunal Malekar, Yingnan He, Apoorva Bommareddy, Colin Magdamo, Arjun Singh, Brandon Westover, Shibani S Mukerji, John Dickson, Sudeshna Das

Abstract read
In one paragraph

Article in JMIR AI, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. AI-enabled resilience modeling for brain health.Frontiers in molecular medicine · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

You Cheng *Department of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0000-0002-3141-0104
Mrunal Malekar *Department of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0009-0004-4709-1998
Yingnan He *Department of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0009-0003-6082-3893
Apoorva BommareddyDepartment of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0009-0003-8920-8608
Colin MagdamoHarvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0001-8965-4630
Arjun SinghDepartment of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0009-0005-4370-3077
Brandon WestoverHarvard Medical School, Boston, MA, United States.ORCID https://orcid.org/0000-0003-4803-312X
Shibani S MukerjiDepartment of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0000-0002-5677-6954
John DicksonDepartment of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0000-0003-0135-7928
Sudeshna DasDepartment of Neurology, Massachusetts General Hospital, Cambridge, MA, United States.ORCID https://orcid.org/0000-0002-9486-6811

Funding

Research Education ComponentP30AG062421 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI Christine S Ritchie · 2019 to 2026
$36.5M
NIA NIH HHS P30 AG062421
6 · The paper itself

Abstract

backgroundAlzheimer disease and related dementias (ADRD) are complex disorders with overlapping symptoms and pathologies. Comprehensive records of symptoms in electronic health records (EHRs) are critical for not only reaching an accurate diagnosis but also supporting ongoing research studies and clinical trials. However, these symptoms are frequently obscured within unstructured clinical notes in EHRs, making manual extraction both time-consuming and labor-intensive.

objectiveWe aimed to automate symptom extraction from the clinical notes of patients with ADRD using fine-tuned large language models (LLMs), compare its performance to regular expression-based symptom recognition, and validate the results using brain magnetic resonance imaging (MRI) data.

methodsWe fine-tuned LLMs to extract ADRD symptoms across the following 7 domains: memory, executive function, motor, language, visuospatial, neuropsychiatric, and sleep. We assessed the algorithm's performance by calculating the area under the receiver operating characteristic curve (AUROC) for each domain. The extracted symptoms were then validated in two analyses: (1) predicting ADRD diagnosis using the counts of extracted symptoms and (2) examining the association between ADRD symptoms and MRI-derived brain volumes.

resultsSymptom extraction across the 7 domains achieved high accuracy with AUROCs ranging from 0.97 to 0.99. Using the counts of extracted symptoms to predict ADRD diagnosis yielded an AUROC of 0.83 (95% CI 0.77-0.89). Symptom associations with brain volumes revealed that a smaller hippocampal volume was linked to memory impairments (odds ratio 0.62, 95% CI 0.46-0.84; P=.006), and reduced pallidum size was associated with motor impairments (odds ratio 0.73, 95% CI 0.58-0.90; P=.04).

conclusionsThese results highlight the accuracy and reliability of our high-throughput ADRD phenotyping algorithm. By enabling automated symptom extraction, our approach has the potential to assist with differential diagnosis, as well as facilitate clinical trials and research studies of dementia.

Indexed as

Alzheimer disease and related dementiasbrain volumedifferential diagnosisdisease phenotypingelectronic health recordlarge language modelsymptom extraction

Identifiers

PMID40460418
PMCPMC12174885

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.