Evidence map›Paper›PMID 40460326›Full record

ReviewThe Journal of physiology2026

Modifying microbially derived short chain fatty acids to promote health.

Alfredo Ornelas, Jacob A Countess, Ji Yeon Kim, Sean P Colgan

Abstract readReview
In one paragraph

Review in The Journal of physiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Metabolite mimicry identifies butyrate analogs with select protective functions in the intestinal mucosa.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alfredo OrnelasMucosal Inflammation Program and Division of Gastroenterology and Hepatology, Department of Medicine, University of Colorado, Boulder, Colorado, USA.ORCID 0000-0002-6773-6691
Jacob A CountessMucosal Inflammation Program and Division of Gastroenterology and Hepatology, Department of Medicine, University of Colorado, Boulder, Colorado, USA.
Ji Yeon KimMucosal Inflammation Program and Division of Gastroenterology and Hepatology, Department of Medicine, University of Colorado, Boulder, Colorado, USA.
Sean P ColganMucosal Inflammation Program and Division of Gastroenterology and Hepatology, Department of Medicine, University of Colorado, Boulder, Colorado, USA.ORCID 0000-0003-0431-8887

Funding

ROLE OF EPITHELIA IN ISCHEMIA/REPERFUSION INJURYR01DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2000 to 2024
$5.0M
Mechanisms of Adenosine ProtectionR01DK095491 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Sean P Colgan · 2012 to 2026
$4.9M
Metabolic Regulation of Inflammation by Microbial SCFAR01DK104713 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Sean P Colgan · 2015 to 2026
$4.7M
Hypoxia, HIF, and Mucosal InflammationR37DK050189 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI COLGAN, SEAN P · 2010 to 2019
$4.1M
Gut microbiome effects on intestinal barrier function and metabolic syndrome in HIV positive men who have sex with menR01DK131581 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Sean P Colgan, Catherine Lozupone · 2022 to 2026
$3.4M
PROTACs Regulating HIF in Mucosal InflammationK01DK143211 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI Alfredo Ornelas Sanchez · 2025 to 2026
$302k
EPITHELIA AND ISCHEMIA/REPERFUSION INJURYR29DK050189 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI COLGAN, SEAN P · 1995 to 1999
–
BLRD VA I01 BX002182BLRD VA IK6 BX006475Crohn's and Colitis Foundation (CCF) RFA 831495HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) DK104713HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) DK143211HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) DK50189HHS | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) DK95491NIDDK NIH HHS K01 DK143211NIDDK NIH HHS R01 DK050189NIDDK NIH HHS R01 DK095491NIDDK NIH HHS R01 DK104713NIDDK NIH HHS R01 DK131581NIDDK NIH HHS R29 DK050189NIDDK NIH HHS R37 DK050189VA BX002182VA BX006475
6 · The paper itself

Abstract

The intestinal mucosa has evolved to facilitate interactions between the host and the constellation of intestinal microbes, collectively termed the microbiota. A well-orchestrated balance exists in the healthy mucosa where microbes and microbial products first encounter a barrier formed by a single layer of intestinal epithelial cells (IECs). This homeostasis exists at a harsh interface between the highly vascularized mucosa and the anaerobic intestinal lumen. This steep oxygen gradient establishes 'physiological hypoxia' as a central metabolic characteristic of the mucosa. Recently, interest in understanding the dynamic host-microbe interplay has identified microbial metabolites that support host functions at several different levels. Of singular relevance are short-chain fatty acids, particularly butyric acid. Studies have demonstrated that IECs have evolved to benefit from butyrate through a plethora of functions, including energy procurement, metabolism, barrier and wound healing regulation, production of antimicrobial peptides, etc. Butyrate is consumed by differentiated colonic epithelial cells preferentially for energy, creating a distinct butyrate gradient along the intestinal cryp-tvillus axis. The depletion of butyrate and butyrate-producing microbes during active inflammation, termed dysbiosis, promotes disease and attenuates tissue healing responses. Furthermore, in a disease state, the butyrate gradient is disrupted leading to reduced utilization of butyrate and inhibition of proliferation of colonic stem cells. Emerging studies suggest that chemical modifications to butyrate could be useful in targeting select IEC functions for particular benefits to the host. In this review, we consider how butyrate molecular mimicry may play out in the setting of mucosal health and disease and discuss current discoveries on endogenous and synthetic butyrate-like compounds and their pathways.

Indexed as

Fatty Acids, VolatileGastrointestinal MicrobiomeIntestinal MucosaAnimalsButyratesHumansButyratesFatty Acids, Volatilebutyratecolitisimmunityinflammationmetabolite‐mimicrymicrobiotamucosa

Identifiers

PMID40460326
PMCPMC12797304

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.