Evidence map›Paper›PMID 40458476›Full record

ArticleFrontiers in bioinformatics2025

Integrative multi-omics study identifies sex-specific molecular signatures and immune modulation in bladder cancer.

Yizhou Wang, Priyanka Bhandary, Kevin Griffin, Jason H Moore, Xue Li, Zhiping Paul Wang

Abstract read
In one paragraph

Article in Frontiers in bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yizhou WangDepartment of Computational Biomedicine, Cedars Sinai Medical Center, Los Angeles, CA, United States.
Priyanka BhandaryDepartment of Computational Biomedicine, Cedars Sinai Medical Center, Los Angeles, CA, United States.
Kevin GriffinDepartment of Medicine and Department of Biomedical Sciences, Cedars Sinai Medical Center, Los Angeles, CA, United States.
Jason H MooreDepartment of Computational Biomedicine, Cedars Sinai Medical Center, Los Angeles, CA, United States.
Xue LiDepartment of Medicine and Department of Biomedical Sciences, Cedars Sinai Medical Center, Los Angeles, CA, United States.
Zhiping Paul WangDepartment of Computational Biomedicine, Cedars Sinai Medical Center, Los Angeles, CA, United States.

Funding

The Role of the Y Chromosome in Bladder Tumor Development, Growth And ProgressionP01CA278732 · NCI · CEDARS-SINAI MEDICAL CENTER · PI Hany Abdel-Malek Abdel-Hafiz · 2023 to 2026
$10.7M
Sexual Dimorphism in Bladder CancerR01CA267108 · NCI · CEDARS-SINAI MEDICAL CENTER · PI Xue Sean Li · 2022 to 2026
$2.9M
NCI NIH HHS P01 CA278732NCI NIH HHS R01 CA267108
6 · The paper itself

Abstract

Introduction: Bladder cancer shows distinct sex-related patterns, with male patients experiencing significantly higher incidence and female patients facing poorer survival outcomes. This study aimed to investigate the biological mechanisms underlying these differences using integrative multi-omics analysis. Methods: We analyzed bladder cancer data from TCGA and GTEx, including genomic mutations, gene expression profiles, and clinical information. We performed protein-protein interaction analysis, pathway enrichment, survival analysis, and immune cell correlation. Results: We identified androgen receptor (AR)-related pathways as uniquely enriched in male-specific hub genes, while the Wnt signaling pathway was enriched in female-specific hub genes. In total, 14 male-specific hub genes showed significant sex-biased survival associations, including known markers-DLGAP5, SOX2, LAMA2, and COL5A2-and novel ones such as ERCC5, NID1, ANK2, and others. For females, three hub genes-RAD51C, COL22A1, and COL5A2-were identified as female-specific with survival associations. Additionally, four male-specific hub genes-DAXX, IKBKB, PDGFRA, and PPARG-were immune-related and showed sex-differential correlations with immune cell infiltration, with three of them associated with AR signaling regulation. Discussion: These findings provide new insights into the molecular basis of sex differences in bladder cancer and could pave the way for more personalized and effective therapeutic strategies tailored to male and female patients.

Indexed as

AR signaling pathwaybladder cancerimmune infiltrationintegrative analysissex dimorphismsurvival analysisTCGAWnt signaling pathway

Identifiers

PMID40458476
PMCPMC12127366

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.