Evidence map›Paper›PMID 40457451›Full record

ArticleGenome biology2025

Differential epigenetic regulation by blue and UV-A light reveals the key role of CsSDG36-mediated H3K4 methylation in leaf development and secondary metabolism in Camellia sinensis.

Pu Wang, Hong Zhang, Yongli Yin, Yue Ge, Binrui Chen, Jing Hu, Yu Wang, Dejiang Ni, Fei Guo

Abstract read
In one paragraph

Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Epigenetic regulation and ROS signaling in plant stress adaptation: an integrated framework.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Allele-specific methylation, and InDels ofHorticulture research · 2026
    Article
  8. Review
  9. Review
  10. Article
  11. Omics landscapes in molecular mechanisms withFood chemistry. Molecular sciences · 2025
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Pu Wang *National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Hong Zhang *National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Yongli YinNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Yue GeNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Binrui ChenNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Jing HuNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Yu WangNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Dejiang NiNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China.
Fei GuoNational Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, China. guofei@mail.hzau.edu.cn.

Funding

National Key Research and Development Program of China 2022YFD1200505Program of Horticultural Crop Germplasm Resources in Hubei Province 2021DFE016Science and Technology Planning Project of Yunnan Provincial Department of Science and Technology 202204AC100001-A01
6 · The paper itself

Abstract

backgroundThere is a Chinese proverb that good tea comes from high mountains with clouds and mists, suggesting the important impact of environmental factors on the development and secondary metabolism in tea plants. However, the epigenetic mechanism involved is still unclear.

resultsHigh altitude results in light enhancement with a higher retention of short-wavelength light in cloudy conditions, suggesting the key role of short-wavelength light in the quality formation of tea plants. Thus, we focus on the representative short-wavelength light, blue and UV-A, and characterize plant responses in epigenome, transcriptome, leaf development, and metabolome. We profile six histone modifications under different light wavelengths and link these to leaf development and secondary metabolism, including changes in gene expression during flavonoid, theanine, caffeine, and β-carotene biosynthesis. There is higher stomatal density and thicker mesophyll tissues under blue light, with higher levels of chlorophyll components under UV-A light. The epigenome results in differential changes of stomatal density and quality components in different light conditions. We further identify crucial histone modifications in leaf development and secondary metabolism. Functional analyses suggest diverse regulations mediated by cryptochrome and phototropin in light adaptation, and we confirm the important role of CsSDG36-mediated histone H3K4 methylation.

conclusionOur results not only reveal the landscape of histone modifications, transcripts, leaf development, and metabolites from different lights in tea plants, but also provide insight into the roles of photoreceptors and epigenetic mechanisms involved in leaf development and secondary metabolism.

Indexed as

Camellia sinensisEpigenesis, GeneticHistonesPlant LeavesPlant ProteinsSecondary MetabolismGene Expression Regulation, PlantLightMethylationTranscriptomeUltraviolet RaysHistonesPlant ProteinsCamellia sinensisDevelopmentHistone modificationLight spectrumSecondary metabolism

Identifiers

PMID40457451
PMCPMC12128338

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.