Evidence map›Paper›PMID 40457411›Full record

ArticleGenome medicine2025

The molecular impact of cigarette smoking resembles aging across tissues.

Jose Miguel Ramirez, Rogério Ribeiro, Oleksandra Soldatkina, Athos Moraes, Raquel García-Pérez, Winona Oliveros, Pedro G Ferreira, Marta Melé

Abstract read
In one paragraph

Article in Genome medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Alzheimer's disease multi-ancestry genome-wide interaction and stratified study with smoking.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  17. Cardiomyopathy in Older Adults.Current cardiology reports · 2025
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jose Miguel Ramirez *Department of Life Sciences, Barcelona Supercomputing Center (BSC), C/Jordi Girona 31, Barcelona, 08034, Spain.
Rogério Ribeiro *Department of Computer Science, Faculty of Sciences, University of Porto, Rua Do Campo Alegre, Porto, 4169-007, Portugal.
Oleksandra SoldatkinaDepartment of Life Sciences, Barcelona Supercomputing Center (BSC), C/Jordi Girona 31, Barcelona, 08034, Spain.
Athos MoraesDepartment of Computer Science, Faculty of Sciences, University of Porto, Rua Do Campo Alegre, Porto, 4169-007, Portugal.
Raquel García-PérezDepartment of Life Sciences, Barcelona Supercomputing Center (BSC), C/Jordi Girona 31, Barcelona, 08034, Spain.
Winona OliverosDepartment of Life Sciences, Barcelona Supercomputing Center (BSC), C/Jordi Girona 31, Barcelona, 08034, Spain.
Pedro G FerreiraDepartment of Computer Science, Faculty of Sciences, University of Porto, Rua Do Campo Alegre, Porto, 4169-007, Portugal. pgferreira@fc.up.pt.
Marta MeléDepartment of Life Sciences, Barcelona Supercomputing Center (BSC), C/Jordi Girona 31, Barcelona, 08034, Spain. marta.mele@bsc.es.

Funding

Fundação para a Ciência e a Tecnologia BD/07092/2021'la Caixa' Foundation LCF/BQ/DR22/11950022MCIN/AEI/10.13039/501100011033 PID2019-107937GA-I00RNCA-FCT 2022.15770.CPCA.A1
6 · The paper itself

Abstract

backgroundTobacco smoke is the main cause of preventable mortality worldwide. Smoking increases the risk of developing many diseases and has been proposed as an aging accelerator. Yet, the molecular mechanisms driving smoking-related health decline and aging acceleration in most tissues remain unexplored.

methodsHere, we use data from the Genotype-Tissue Expression Project (GTEx) to perform a characterization of the effect of cigarette smoking across human tissues. We perform a multi-tissue analysis across 46 human tissues. Our multi-omics characterization includes analysis of gene expression, alternative splicing, DNA methylation, and histological alterations. We further analyze ex-smoker samples to assess the reversibility of these molecular alterations upon smoking cessation.

resultsWe show that smoking impacts tissue architecture and triggers systemic inflammation. We find that in many tissues, the effects of smoking significantly overlap those of aging. Specifically, both age and smoking upregulate inflammatory genes and drive hypomethylation at enhancers (odds ratio (OR) = 2). In addition, we observe widespread smoking-driven hypermethylation at target regions of the Polycomb repressive complex (OR = 2), which is a well-known aging effect. Smoking-induced epigenetic changes overlap causal aging CpGs, suggesting that these methylation changes may directly mediate the aging acceleration observed in smokers. Finally, we find that smoking effects that are shared with aging are more persistent over time.

conclusionOverall, our multi-tissue and multi-omic analysis of the effects of cigarette smoking provides an extensive characterization of the impact of tobacco smoke across tissues and unravels the molecular mechanisms driving smoking-induced tissue homeostasis decline and aging acceleration.

Indexed as

AgingCigarette SmokingDNA MethylationEpigenesis, GeneticHumansInflammationMaleMiddle AgedOrgan SpecificityAgingCigarette smokingDNA methylationGene expressionHistology imagesMulti-omicsMulti-tissue

Identifiers

PMID40457411
PMCPMC12131351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.