Evidence map›Paper›PMID 40457360›Full record

ArticleBMC veterinary research2025

Integrative transcriptomic and proteomic analyses reveal that carbon metabolism and complement system of Madin Darby Bovine Kidney cells are affected by bovine coronavirus infection.

Hui Zhang, Qisheng Yu, Rui Guo, Qing Zhu, Jin Yu, Zhaohui Zhang, Lan Lan, Cheng Tang, Changqing Yu, Bin Zhang

Abstract read
In one paragraph

Article in BMC veterinary research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hui Zhang *College of Animal and Veterinary Sciences, Southwest Minzu University, Chengdu, 610041, China.
Qisheng Yu *College of Animal and Veterinary Sciences, Southwest Minzu University, Chengdu, 610041, China.
Rui GuoCollege of Animal and Veterinary Sciences, Southwest Minzu University, Chengdu, 610041, China.
Qing ZhuCenter for Animal Disease Control and Prevention, Ganzi Tibetan Autonomous Prefectue, Kangding, 626000, China.
Jin YuCenter for Animal Disease Control and Prevention, Ganzi Tibetan Autonomous Prefectue, Kangding, 626000, China.
Zhaohui ZhangCenter for Animal Disease Control and Prevention, Ganzi Tibetan Autonomous Prefectue, Kangding, 626000, China.
Lan LanAnimal Husbandry Science Institute of Ganzi Tibetan Autonomous Prefecture, Kangding, 626000, China.
Cheng TangCollege of Animal and Veterinary Sciences, Southwest Minzu University, Chengdu, 610041, China.
Changqing YuEngineering Center of Agricultural Biosafety Assessment and Biotechnology, School of Advanced Agricultural Sciences, Yibin Vocational and Technical College, Yibin, 644001, China. ycq_1926@126.com.
Bin ZhangCollege of Animal and Veterinary Sciences, Southwest Minzu University, Chengdu, 610041, China. binovy@sina.com.

Funding

Sichuan Central Guiding Local Technology Development Project 2024ZYD0072Southwest Minzu University Research Startup Funds RQD2023031the Program Sichuan Veterinary Medicine and Drug Innovation Group of China Agricultural Research System SCCXTD-2025-18the Science and Technology Planning Project of Yibin Vocational and Technical College YBZYSC22BK07
6 · The paper itself

Abstract

backgroundBovine coronavirus (BCoV) is a major pathogen of bovine respiratory disease, causing respiratory and enteric infections in cattle and wild ruminants. It is responsible for economic losses and threatens the health and welfare of cattle industry.

resultsIn this study, a BCoV isolate, BCoV/SUWN/XHD-5, had cytopathogenic effects in Madin Darby bovine kidney (MDBK) cells and showed a high viral titer at 24 and 48 h post infection (hpi). Gene expression profiling using RNA sequencing and protein network mapping using the Tandem Mass Tag-based quantitative proteomics approach were performed in MDBK cells with BCoV infection at 24 and 48 hpi, respectively. Compared with mock-infected MDBK cells, 8,720 differentially expressed genes (DEGs) and 296 differentially expressed proteins (DEPs) were identified in BCoV infection at 24 hpi, whereas 5,838 DEGs and 747 DEPs were identified in BCoV infection at 48 hpi. Following GO annotation and KEGG enrichment analysis, most DEGs and DEPs were significantly enriched in metabolic pathways, endocytosis, ribosome and protein processing in endoplasmic reticulum, apoptosis and immune response. A correlation analysis of the proteome and transcriptome revealed that the up-regulated DEGs and DEPs were predominantly associated with metabolic pathways, apoptosis and the MAPK/TNF/Ras signaling pathway, whereas the down-regulated DEGs and DEPs were involved in complement and coagulation cascades and the Wnt signaling pathway. Importantly, BCoV decreases the mRNA and protein levels of complement component C3 in MDBK cells.

conclusionsThe findings of this study provide the first report of the integrative transcriptomic and proteomic analyses of BCoV infection in MDBK cells. It revealed a regulatory network for analyzing the mechanisms of BCoV-host interactions and provides valuable insights into the pathogenesis of BCoV.

Indexed as

CarbonCattle DiseasesComplement System ProteinsCoronavirus, BovineCoronavirus InfectionsAnimalsCattleCell LineGene Expression ProfilingKidneyProteomicsTranscriptomeCarbonComplement System ProteinsBovine coronavirusC3Carbon metabolismComplement systemsMDBKProteomicsTranscriptomics

Identifiers

PMID40457360
PMCPMC12131655

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.