Evidence map›Paper›PMID 40456907›Full record

ArticleNature neuroscience2025

Neuronal aging causes mislocalization of splicing proteins and unchecked cellular stress.

Kevin Rhine, Rachel Li, Hema M Kopalle, Katherine Rothamel, Xuezhen Ge, Elle Epstein, Orel Mizrahi, Assael A Madrigal, Hsuan-Lin Her, Trent A Gomberg and 8 more

Abstract read
In one paragraph

Article in Nature neuroscience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. TDP-43: [GU]-ardian of the transcriptome.Molecular neurodegeneration · 2026
    Review
  10. Article
  11. Review
  12. Article
  13. Review of the Pathology of Muscle in Amyotrophic Lateral Sclerosis.International journal of molecular sciences · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Neurodegenerative spliceosomopathies.Frontiers in cell and developmental biology · 2026
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Kevin RhineDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-1355-2405
Rachel LiDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Hema M KopalleDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-1872-7318
Katherine RothamelDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Xuezhen GeDepartment of Cell & Developmental Biology, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0009-0006-3643-235X
Elle EpsteinDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Orel MizrahiDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Assael A MadrigalDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-3311-5256
Hsuan-Lin HerDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Trent A GombergDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.
Anita HermannDepartment of Neurosciences, School of Medicine, University of California San Diego, La Jolla, CA, USA.
Joshua L SchwartzDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-4263-2829
Amanda J DanielsSanford Stem Cell Institute Innovation Center and Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, CA, USA.
Uri ManorWaitt Advanced Biophotonics Center, Salk Institute for Biological Studies, La Jolla, CA, USA.
John RavitsDepartment of Neurosciences, School of Medicine, University of California San Diego, La Jolla, CA, USA.
Robert A J SignerSanford Stem Cell Institute Innovation Center and Sanford Consortium for Regenerative Medicine, University of California San Diego, La Jolla, CA, USA.
Eric J BennettDepartment of Cell & Developmental Biology, University of California San Diego, La Jolla, CA, USA.
Gene W YeoDepartment of Cellular & Molecular Medicine, University of California San Diego, La Jolla, CA, USA. geneyeo@ucsd.edu.ORCID http://orcid.org/0000-0002-0799-6037

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Alan Saghatelian · 1985 to 2026
$82.8M
Functional RNA elements in the human genomeR01HG004659 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Kevin Daniel Corbett, Eugene Wei-Ming Yeo · 2008 to 2026
$12.4M
Predoctoral and Postdoctoral Training in Cancer Cell BiologyT32CA067754 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEAN Y.J. WANG · 1995 to 2026
$6.5M
San Diego Nathan Shock CenterP30AG068635 · NIA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI SHADEL, GERALD · 2020 to 2024
$6.0M
Mechanisms of Prion Aggregation and Species BarriersR01NS069566 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D, RAVITS, JOHN · 2011 to 2025
$5.7M
Therapeutic strategies for microsatellite expansion diseases using RNA-targeting CRISPR/CasR01NS103172 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MAURICE SCOTT SWANSON, Eugene Wei-Ming Yeo · 2017 to 2026
$5.6M
UC San Diego Genetics Training ProgramT32GM145427 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRUCE A HAMILTON · 2022 to 2026
$2.6M
Leveraging ubiquitin-dependent regulatory mechanisms to improve proteome quality in health and diseaseR35GM148339 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Eric J Bennett · 2023 to 2026
$2.1M
The influence of proteostasis loss in aging hematopoietic stem cells on leukemia initiationU01CA267031 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MAGEE, JEFFREY ALAN, SIGNER, ROBERT A.J. · 2021 to 2025
$2.0M
Amyotrophic Lateral Sclerosis Association (ALS Association) 23-PDF-639National Science Foundation (NSF) DGE-2038238NCI NIH HHS P30 CA014195NCI NIH HHS T32 CA067754NCI NIH HHS U01 CA267031NHGRI NIH HHS R01 HG004659NIA NIH HHS P30 AG068635NIGMS NIH HHS R35 GM148339NIGMS NIH HHS T32 GM145427NINDS NIH HHS R01 NS069566NINDS NIH HHS R01 NS103172Target ALS (Target ALS Foundation) IL-2023-C2-L4U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) P30-CA014195U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) T32-CA067754U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) U01-CA267031U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01-HG004659U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35-GM148339U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01-NS103172U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) P30-AG068635
6 · The paper itself

Abstract

Aging is one of the most prominent risk factors for neurodegeneration, yet the molecular mechanisms underlying the deterioration of old neurons are mostly unknown. To efficiently study neurodegeneration in the context of aging, we transdifferentiated primary human fibroblasts from aged healthy donors directly into neurons, which retained their aging hallmarks, and we verified key findings in aged human and mouse brain tissue. Here we show that aged neurons are broadly depleted of RNA-binding proteins, especially spliceosome components. Intriguingly, splicing proteins-like the dementia- and ALS-associated protein TDP-43-mislocalize to the cytoplasm in aged neurons, which leads to widespread alternative splicing. Cytoplasmic spliceosome components are typically recruited to stress granules, but aged neurons suffer from chronic cellular stress that prevents this sequestration. We link chronic stress to the malfunctioning ubiquitylation machinery, poor HSP90α chaperone activity and the failure to respond to new stress events. Together, our data demonstrate that aging-linked deterioration of RNA biology is a key driver of poor resiliency in aged neurons.

Indexed as

AgingCellular SenescenceNeuronsRNA-Binding ProteinsStress, PhysiologicalAgedAnimalsCells, CulturedDNA-Binding ProteinsFibroblastsHumansMiceMice, Inbred C57BLDNA-Binding ProteinsRNA-Binding Proteins

Identifiers

PMID40456907
PMCPMC12148940

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.