Evidence map›Paper›PMID 40454959›Full record

ArticleRNA biology2025

Investigation of possible G-quadruplex formation by GU- and GA-rich repeats and their role in translation.

Bas M Morren, Jitske Marcelis, Iza Muradin, René C L Olsthoorn

Abstract read
In one paragraph

Article in RNA biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Sequence and ionic requirements of pUG fold quadruplexes.bioRxiv : the preprint server for biology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Bas M MorrenLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
Jitske MarcelisLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
Iza MuradinLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.
René C L OlsthoornLeiden Institute of Chemistry, Leiden University, Leiden, The Netherlands.ORCID 0000-0003-0315-3005

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA G-quadruplexes (rG4s) are involved in many aspects of cellular and viral protein expression. rG4s consist of at least two stacks of guanine tetrads that are stabilized by non-Watson-Crick-Franklin base pairs. It is currently unknown how single or multiple non-G nucleotide insertions affect the stability or function of rG4s. Here, we investigated the G4-forming potential of GU- and GA-rich sequences by measuring their ability to inhibit ribosomal scanning and induce -1 ribosomal frameshifting (-1 FS) using a cell-free lysate. Our results show that, in contrast to canonical rG4s, GU and GA repeats with eight or more guanines do not affect ribosomal scanning or stimulate -1 FS. However, in the presence of G4-stabilizing ligands PhenDC3 or pyridostatin, GU and GA repeats strongly inhibited scanning and induced -1 FS. These findings have implications for the structural landscape of rG4s and the potential side-effects of G4 targeting drugs in general.

Indexed as

G-QuadruplexesGuanineProtein BiosynthesisRNAAminoquinolinesFrameshifting, RibosomalHumansNucleic Acid ConformationPicolinic AcidsRibosomesAminoquinolinesGuaninePicolinic AcidspyridostatinRNAdinucleotide repeatsG-quadruplexPhenDC3ribosomal frameshiftingtranslation

Identifiers

PMID40454959
PMCPMC12710887

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.